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The map label for this gene is 89056012

Identifier: 89056012

GI number: 89056012

Start: 3578679

End: 3579947

Strand: Direct

Name: 89056012

Synonym: Jann_3521

Alternate gene names: NA

Gene position: 3578679-3579947 (Clockwise)

Preceding gene: 89056011

Following gene: 89056014

Centisome position: 82.88

GC content: 61.94

Gene sequence:

>1269_bases
ATGAGCATTGCCAAACGAGGTCGCACATACCACCTCCGTCGCCGGGTTCCGCGTCGGTATCGCAGGGTTGAACCGCGTGG
AACGGTCTGGATCAGCCTGCATACGGACTCGGAGACGGTTGCCCGGAGCAAGGCCGACCGGGCGTGGAGCCAGATGATTG
AGGCGTGGGAGGCGCGGCTGGCCGGGAACAGCGCAGACGCGGAGGCGCGACACGAGGCGGCGCGCGATCTGGCCCGTACG
CGGGGCTTTGGATACTTGGATGCAGGCGCTGTAGCAAAGCTGCCAGTCGAGGATGTCGTCGAGCGGGTTGAAGCGATCCC
GGTGCCGGCAAAGCAGCCCGACCCGGTTGAAGCCGCCACACTTCTCGGCACGGTCCCTAAGCCGCGCACCACGGTCACCA
AGGCGCTGGAGCTTTACTGGACGCTGGCCCGTGAGAAGACCTTCGGCAAAAGCGAGGACCAAATGCGCCGCTGGGAAGCC
CCCCGGAACAAAGCCATCAAAAATTTTGTGTCGGTCGTCGGCGACAAGGAAATCGCCAACATCACCCGCGACGACATGCT
GGACTTTCGCCAGCATTGGCTTGATCGGATCGAAGCAGGTGAGGTCACGGCCAATTCCGCTAACAAGGATCTGATCCATC
TCGGCGATGTGCTGAAGACCGTGAACACGATGAAGCGGCTTGGGCTGGATCTTCCGTTGGGTGAGTTGTCGTTCAAACAG
GGTGAGGCTCGGACCCGTCCACCATTCAGTAATGATTGGATCACGACGCGCCTGCTTACGCCCGGTGCGCTCGACGGGTT
GAACAACGAAGCGCGGGGCCTACTGCTTGGTATGGTGAACACAGGCTACCGCCCGTCCGAGGGCGCCGCGCTGACAGTGG
ACACGATCCGGCTCGATTGCGACGTGCCGCATATCTCCATCGAACCCGACGGGCGGCAACTCAAGTCGCACCATGCTCGC
CGAGTCATTCCCCTAACCGGTGTCTCCCTGAAGGCATTTGAGCAATTCCCCGAGGGCTTCCCTCGCTACCGCAACCGAGC
CACGCTCAGCGCGGTTGTTAACAAGTTCCTCCGCACCAACGGCCTGCTCGAGACGCCGCGCCATTCCTTTTACTCGCTGC
GTCATTCTTTTGAGGACCGCATGCTCGCTGCCGGGATCGACGACCGGATAAGGCGTGATCTGTTTGGTCATCGGTTGGAT
CGGGAACGGTACGGCAAGGGCGCGTCGCTGGAACATGTGGCCGAGCTCGTCGCTCGCATCGCCTTCTGA

Upstream 100 bases:

>100_bases
CGATTTTCGGTGTTTTCGCGCTTACGACGTCTCTCGGTCCGCTTGATTTGCTGCACATTTTGCTACACAATTTGCTGCAC
AAGTACGGAGATTTTCCGTC

Downstream 100 bases:

>100_bases
GCGAGGAGCGCCCTCGCTCTGCGCTGCGCCTCATTGAGCCGCATCTCATCTTGGACATAGGCGGTCAGTTCCGCTTCCAA
ACGCTCAAAGATCGGTGCGA

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Protein

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSIAKRGRTYHLRRRVPRRYRRVEPRGTVWISLHTDSETVARSKADRAWSQMIEAWEARLAGNSADAEARHEAARDLART
RGFGYLDAGAVAKLPVEDVVERVEAIPVPAKQPDPVEAATLLGTVPKPRTTVTKALELYWTLAREKTFGKSEDQMRRWEA
PRNKAIKNFVSVVGDKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLDLPLGELSFKQ
GEARTRPPFSNDWITTRLLTPGALDGLNNEARGLLLGMVNTGYRPSEGAALTVDTIRLDCDVPHISIEPDGRQLKSHHAR
RVIPLTGVSLKAFEQFPEGFPRYRNRATLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVARIAF

Sequences:

>Translated_422_residues
MSIAKRGRTYHLRRRVPRRYRRVEPRGTVWISLHTDSETVARSKADRAWSQMIEAWEARLAGNSADAEARHEAARDLART
RGFGYLDAGAVAKLPVEDVVERVEAIPVPAKQPDPVEAATLLGTVPKPRTTVTKALELYWTLAREKTFGKSEDQMRRWEA
PRNKAIKNFVSVVGDKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLDLPLGELSFKQ
GEARTRPPFSNDWITTRLLTPGALDGLNNEARGLLLGMVNTGYRPSEGAALTVDTIRLDCDVPHISIEPDGRQLKSHHAR
RVIPLTGVSLKAFEQFPEGFPRYRNRATLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVARIAF
>Mature_421_residues
SIAKRGRTYHLRRRVPRRYRRVEPRGTVWISLHTDSETVARSKADRAWSQMIEAWEARLAGNSADAEARHEAARDLARTR
GFGYLDAGAVAKLPVEDVVERVEAIPVPAKQPDPVEAATLLGTVPKPRTTVTKALELYWTLAREKTFGKSEDQMRRWEAP
RNKAIKNFVSVVGDKEIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLDLPLGELSFKQG
EARTRPPFSNDWITTRLLTPGALDGLNNEARGLLLGMVNTGYRPSEGAALTVDTIRLDCDVPHISIEPDGRQLKSHHARR
VIPLTGVSLKAFEQFPEGFPRYRNRATLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDR
ERYGKGASLEHVAELVARIAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47676; Mature: 47545

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAKRGRTYHLRRRVPRRYRRVEPRGTVWISLHTDSETVARSKADRAWSQMIEAWEARL
CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AGNSADAEARHEAARDLARTRGFGYLDAGAVAKLPVEDVVERVEAIPVPAKQPDPVEAAT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHH
LLGTVPKPRTTVTKALELYWTLAREKTFGKSEDQMRRWEAPRNKAIKNFVSVVGDKEIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLDLPLGELSFKQ
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GEARTRPPFSNDWITTRLLTPGALDGLNNEARGLLLGMVNTGYRPSEGAALTVDTIRLDC
CCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC
DVPHISIEPDGRQLKSHHARRVIPLTGVSLKAFEQFPEGFPRYRNRATLSAVVNKFLRTN
CCCEEEECCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
GLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDRERYGKGASLEHVAELVARI
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH
AF
CC
>Mature Secondary Structure 
SIAKRGRTYHLRRRVPRRYRRVEPRGTVWISLHTDSETVARSKADRAWSQMIEAWEARL
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AGNSADAEARHEAARDLARTRGFGYLDAGAVAKLPVEDVVERVEAIPVPAKQPDPVEAAT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHH
LLGTVPKPRTTVTKALELYWTLAREKTFGKSEDQMRRWEAPRNKAIKNFVSVVGDKEIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLDLPLGELSFKQ
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GEARTRPPFSNDWITTRLLTPGALDGLNNEARGLLLGMVNTGYRPSEGAALTVDTIRLDC
CCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC
DVPHISIEPDGRQLKSHHARRVIPLTGVSLKAFEQFPEGFPRYRNRATLSAVVNKFLRTN
CCCEEEECCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
GLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDRERYGKGASLEHVAELVARI
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA