| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is uhpB [H]
Identifier: 89056007
GI number: 89056007
Start: 3571943
End: 3573787
Strand: Direct
Name: uhpB [H]
Synonym: Jann_3516
Alternate gene names: 89056007
Gene position: 3571943-3573787 (Clockwise)
Preceding gene: 89056006
Following gene: 89056008
Centisome position: 82.72
GC content: 62.01
Gene sequence:
>1845_bases GTGAACGGAAAGATCTTGCGGATTTCGGTGGCGATGGCGCTTTGGATCGCATCGCTGACCGCGCTTTTGTTTGCCCTGAA TATCGGACGCGCCGTCCCTATTGACGGGGCCCGGCTTATCGAGACGGCCACACTTTGCTCCGATCCCGCGCGACCTGCGA CCTGTGCGGATATCTCTTTGCCCTACCATTCCGAACGGCCAACTCAGGATCGCACCCTCACCCGGTATTTTGCCGTGGAC ATCCCGTTGGACCCTGCGACGGAGGGCCTGCAGGCCCTCTACCTGCCCAAACTTGCAGATACGGTCACAGTGACGCTCAA CGGCGAAACTCTGTTCGAGCCGCCCATGAACCGCAGCCTGGATAGTACGCCCGTGCTGATCCCCATTCCGCCTGCTCTGC TAGACGACGATATGGCGCGGTTCGTCCTGACGCTTCGGGGGGCCGCGCCGGAAGGGTTGGACCTCTGGCCATTCCATATC GGCCCCCACGCGCACCTCGCCCCGGTCCACGACACCCGCATGAGTTTTGGGCCGGGCGTGGCGCGGTTCTCCATGGGCAT CATGGCCGTACTGGCGATTGCCCTGCTGTTGATCTGGTGGAACCGCCGGGCCGAACGGCACTATCTCTGGCTCGCGGCCT CCTGTCTCAGCGTGCTCTTCATCCTGACGCACATCGCATTCGGCGCATCAATTGGATCCTACAAGATATGGACGATCCTG TGGTCGTTCTCGGCGGCGGTCTACGTCTTCACCATCCTGAAGTTTCTACGTCACTTCCTGTCGCTGCCCGTTCTGACGTT GGAAAGGGTACACCTCAGCTCGATCCTGCTATGTGCGCTCGTCGCGCTTGTCTTGCCGGGGGGGTACACCTTCTCGGTCT CGCTCACCATCAATGCGCTCAGCGCCCCGTCCGCGCTGGCCGTCCTCGTGCTGCTGTGGATGCGCCGGACGGAGCTTGCA GGGCGCGATTTTGCCGTGTTCTTCACCTGCATGTCTATTGCGGTGACATTGGGTGTCTACACCCTGACCATTACGGCCTT GCCCAACACGCCGCGCAGCTTGCAACTGTATCAGATCATGCCGTTGGTCATGTCATTTGCCTGCGTCTATCTTATCCTGG CGAAATTCCTGCAAAGCCTGCACGGATATGAGGCGTTGACCACGTCCTTGAACCAGACCCTCGACCAACGCACCCGGGAA TTGGAAGAGAGTTTCACCCGCCTTGCCCAGACCGAAAAGCGAGAGGTGATTGCCCAGGAACGCTCTCGCATCATGCTGGA TCTGCATGACGGGTTGGGCGGTCAGTTGGTGAATACGCTGGCCTATATTCGCCGCACGGGATCAGGGGATGACACGATCC GCCTGGCCTTGGAGGATGCGTTGCGCGACCTTGCCATGATGCTGGACAGTGTCGAAAGCCAGGAAAGCCTGGTGACCCTT CTGGGCATGATGCGCACGCGGCTGGAGGGTCTTTTGGCCGACAACGGGATCACATTCGACTGGCAAATCGGCGATGAGCC CGTGGCGCCCGTGTCCGGCCCCTCCCCCAACCTGAACTTGGCGCGGATCGTGCAGGAGGCGATTACCAACGTGATCAAAC ACGCCGACGCGAGCGTGATCCGCGTGGAAACGGACGCGCGCACCATCTCCATCAGCGACAACGGCACGGGGTTCGATGCG GAAGCCGGGCGCGCGGGGTCGCAGGGCCACGGGATCTCCAACATGCGGCGCCGGGCGGAGGCATTGGGCGCCCGGCTGGA GATCGCATCAGACGCGTCCGGCACGCGGGTGTCACTCGCGTTTCCTGACGCGGCTGCCCCCAAGCCCTGCTCCGATGCCG CGTGA
Upstream 100 bases:
>100_bases CGGCCGGCACCGTGGGCAATCACATCACCAGCATCTATCGCAAGCTGGAGGTGTCCTCCAACATCGAGGCGGTGGCCATC GCCTCCCGGAGTGGCATGTT
Downstream 100 bases:
>100_bases ATAGCACTGCGGATGCCCTGGTTATCGGTCATCGCCCGCTCACGGTGAGGATTGTGAAACCTGGCTATGGCAGGGGTAGA CCGTTGTAATCATGGTGCCT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MNGKILRISVAMALWIASLTALLFALNIGRAVPIDGARLIETATLCSDPARPATCADISLPYHSERPTQDRTLTRYFAVD IPLDPATEGLQALYLPKLADTVTVTLNGETLFEPPMNRSLDSTPVLIPIPPALLDDDMARFVLTLRGAAPEGLDLWPFHI GPHAHLAPVHDTRMSFGPGVARFSMGIMAVLAIALLLIWWNRRAERHYLWLAASCLSVLFILTHIAFGASIGSYKIWTIL WSFSAAVYVFTILKFLRHFLSLPVLTLERVHLSSILLCALVALVLPGGYTFSVSLTINALSAPSALAVLVLLWMRRTELA GRDFAVFFTCMSIAVTLGVYTLTITALPNTPRSLQLYQIMPLVMSFACVYLILAKFLQSLHGYEALTTSLNQTLDQRTRE LEESFTRLAQTEKREVIAQERSRIMLDLHDGLGGQLVNTLAYIRRTGSGDDTIRLALEDALRDLAMMLDSVESQESLVTL LGMMRTRLEGLLADNGITFDWQIGDEPVAPVSGPSPNLNLARIVQEAITNVIKHADASVIRVETDARTISISDNGTGFDA EAGRAGSQGHGISNMRRRAEALGARLEIASDASGTRVSLAFPDAAAPKPCSDAA
Sequences:
>Translated_614_residues MNGKILRISVAMALWIASLTALLFALNIGRAVPIDGARLIETATLCSDPARPATCADISLPYHSERPTQDRTLTRYFAVD IPLDPATEGLQALYLPKLADTVTVTLNGETLFEPPMNRSLDSTPVLIPIPPALLDDDMARFVLTLRGAAPEGLDLWPFHI GPHAHLAPVHDTRMSFGPGVARFSMGIMAVLAIALLLIWWNRRAERHYLWLAASCLSVLFILTHIAFGASIGSYKIWTIL WSFSAAVYVFTILKFLRHFLSLPVLTLERVHLSSILLCALVALVLPGGYTFSVSLTINALSAPSALAVLVLLWMRRTELA GRDFAVFFTCMSIAVTLGVYTLTITALPNTPRSLQLYQIMPLVMSFACVYLILAKFLQSLHGYEALTTSLNQTLDQRTRE LEESFTRLAQTEKREVIAQERSRIMLDLHDGLGGQLVNTLAYIRRTGSGDDTIRLALEDALRDLAMMLDSVESQESLVTL LGMMRTRLEGLLADNGITFDWQIGDEPVAPVSGPSPNLNLARIVQEAITNVIKHADASVIRVETDARTISISDNGTGFDA EAGRAGSQGHGISNMRRRAEALGARLEIASDASGTRVSLAFPDAAAPKPCSDAA >Mature_614_residues MNGKILRISVAMALWIASLTALLFALNIGRAVPIDGARLIETATLCSDPARPATCADISLPYHSERPTQDRTLTRYFAVD IPLDPATEGLQALYLPKLADTVTVTLNGETLFEPPMNRSLDSTPVLIPIPPALLDDDMARFVLTLRGAAPEGLDLWPFHI GPHAHLAPVHDTRMSFGPGVARFSMGIMAVLAIALLLIWWNRRAERHYLWLAASCLSVLFILTHIAFGASIGSYKIWTIL WSFSAAVYVFTILKFLRHFLSLPVLTLERVHLSSILLCALVALVLPGGYTFSVSLTINALSAPSALAVLVLLWMRRTELA GRDFAVFFTCMSIAVTLGVYTLTITALPNTPRSLQLYQIMPLVMSFACVYLILAKFLQSLHGYEALTTSLNQTLDQRTRE LEESFTRLAQTEKREVIAQERSRIMLDLHDGLGGQLVNTLAYIRRTGSGDDTIRLALEDALRDLAMMLDSVESQESLVTL LGMMRTRLEGLLADNGITFDWQIGDEPVAPVSGPSPNLNLARIVQEAITNVIKHADASVIRVETDARTISISDNGTGFDA EAGRAGSQGHGISNMRRRAEALGARLEIASDASGTRVSLAFPDAAAPKPCSDAA
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66957; Mature: 66957
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKILRISVAMALWIASLTALLFALNIGRAVPIDGARLIETATLCSDPARPATCADISL CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC PYHSERPTQDRTLTRYFAVDIPLDPATEGLQALYLPKLADTVTVTLNGETLFEPPMNRSL CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCC DSTPVLIPIPPALLDDDMARFVLTLRGAAPEGLDLWPFHIGPHAHLAPVHDTRMSFGPGV CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEECEEEECCCCCCCCCCCCCCCCCCCH ARFSMGIMAVLAIALLLIWWNRRAERHYLWLAASCLSVLFILTHIAFGASIGSYKIWTIL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH WSFSAAVYVFTILKFLRHFLSLPVLTLERVHLSSILLCALVALVLPGGYTFSVSLTINAL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC SAPSALAVLVLLWMRRTELAGRDFAVFFTCMSIAVTLGVYTLTITALPNTPRSLQLYQIM CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHH PLVMSFACVYLILAKFLQSLHGYEALTTSLNQTLDQRTRELEESFTRLAQTEKREVIAQE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRIMLDLHDGLGGQLVNTLAYIRRTGSGDDTIRLALEDALRDLAMMLDSVESQESLVTL HCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHH LGMMRTRLEGLLADNGITFDWQIGDEPVAPVSGPSPNLNLARIVQEAITNVIKHADASVI HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE RVETDARTISISDNGTGFDAEAGRAGSQGHGISNMRRRAEALGARLEIASDASGTRVSLA EEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEE FPDAAAPKPCSDAA CCCCCCCCCCCCCC >Mature Secondary Structure MNGKILRISVAMALWIASLTALLFALNIGRAVPIDGARLIETATLCSDPARPATCADISL CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC PYHSERPTQDRTLTRYFAVDIPLDPATEGLQALYLPKLADTVTVTLNGETLFEPPMNRSL CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCC DSTPVLIPIPPALLDDDMARFVLTLRGAAPEGLDLWPFHIGPHAHLAPVHDTRMSFGPGV CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCEECEEEECCCCCCCCCCCCCCCCCCCH ARFSMGIMAVLAIALLLIWWNRRAERHYLWLAASCLSVLFILTHIAFGASIGSYKIWTIL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH WSFSAAVYVFTILKFLRHFLSLPVLTLERVHLSSILLCALVALVLPGGYTFSVSLTINAL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC SAPSALAVLVLLWMRRTELAGRDFAVFFTCMSIAVTLGVYTLTITALPNTPRSLQLYQIM CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHH PLVMSFACVYLILAKFLQSLHGYEALTTSLNQTLDQRTRELEESFTRLAQTEKREVIAQE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRIMLDLHDGLGGQLVNTLAYIRRTGSGDDTIRLALEDALRDLAMMLDSVESQESLVTL HCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHH LGMMRTRLEGLLADNGITFDWQIGDEPVAPVSGPSPNLNLARIVQEAITNVIKHADASVI HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE RVETDARTISISDNGTGFDAEAGRAGSQGHGISNMRRRAEALGARLEIASDASGTRVSLA EEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEE FPDAAAPKPCSDAA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]