| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is fabH [H]
Identifier: 89055811
GI number: 89055811
Start: 3373414
End: 3374538
Strand: Direct
Name: fabH [H]
Synonym: Jann_3320
Alternate gene names: 89055811
Gene position: 3373414-3374538 (Clockwise)
Preceding gene: 89055810
Following gene: 89055812
Centisome position: 78.12
GC content: 60.27
Gene sequence:
>1125_bases ATGTTTGAGCCAGCCATCACCGGATCAGGCGTTTTCACGCCCGATCAGAGCATTTCCAACGATGAACTTGTGGTGGCCTT CAACGCCTATGCCGACCGCTGGAACGCCGAGAATGCCGCCGCGATCAAGGCCGGTGACGTCGACGCCATGGCCCATTCTT CCTCTGAATTCATCGTTGCGGCCTCGGGCATCGAGTCGCGCTATGTGCTGGATAAGACGGGTCTTCTGGACCCCGATATC ATGCATCCCCTGCTGCCGGAGCGCGCCATGGATCAGCCCGGCGTCATGGCCGAGATGGGCGTGGATGCCTGCCGCAAGGC GCTTGATATGGCGGGGGTGGCAGCGGGCGACGTTGATGCGGTGATCTGTGCGGCCTCCAACCTGGAACGCGCCTACCCGG CCATCGCCATCGAGATCCAGGAGGCGCTTGGCACCCGTGGCTTCGGGTTTGACATGAACGTCGCGTGTTCCTCGGCCACG TTCGGGATACAGGCCGCCGCTGACATGATCCGGTCAGGCTCCATTCAACGGGCCCTGGTGGTGAACCCGGAGATCTGTTC CGCCCATCTGGAATGGCGCGACCGTGATTGTCATTTCATTTTCGGCGACGTGGCCACGGCTGTTCTGATTGAGCGCAGCG ATCTGGCCAAGGGCGAGAAATTCATCATCAAATCCACCCGCTGCGCCACCAAATTCTCCAACAATATCCGTAACAACAAC GGCTTCCTGCGCCGCACGCGGGACGGTCACATGGACGACCGGCGCGACATGCTGTTCATGCAAAACGGGCGCAAGGTGTT CAAGGAAGTGCTGCCGCTGGTCTCCAGACACATCGCCGAGCATATGGAGGATGCGGGCGTTCAGGCCGATGACCTCAAGC GCCTCTGGCTGCATCAGGCCAACAAGACGATGAACGACTACATCGGAAAGAAGGTGCTGGGACGGGTGCCGGAGGCGGGC GAACAGCCCAATATCCTGCAGGATTATGCCAACACCTCCTCTGCCGGGTCTATCATCGCATTCGCGAAATATTCCAATGA CTTGGCCCCCGGCGATACGGGGCTGATCTGTTCATTCGGGGCCGGGTATTCGGTGGGGTCCGTGATCCTGGAAAAGACCG CTTAG
Upstream 100 bases:
>100_bases GCCTGGACGGCTGCGCCTGACGCCGCGGAATTGACCGGCCCACACCTTGACGCGGCTGCCCTTTCCCGCGCAAGAAAACA GACCGGACCCGGAGAGCGAC
Downstream 100 bases:
>100_bases AAATTGCGGCCACTTGCGCTAACGTGCGCGCGCATCACTACCGGAGCCGCCGCCCATGGCCGACCTGTCTCACCTCATCT ATTCCTCCACGCCCTTCGGA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MFEPAITGSGVFTPDQSISNDELVVAFNAYADRWNAENAAAIKAGDVDAMAHSSSEFIVAASGIESRYVLDKTGLLDPDI MHPLLPERAMDQPGVMAEMGVDACRKALDMAGVAAGDVDAVICAASNLERAYPAIAIEIQEALGTRGFGFDMNVACSSAT FGIQAAADMIRSGSIQRALVVNPEICSAHLEWRDRDCHFIFGDVATAVLIERSDLAKGEKFIIKSTRCATKFSNNIRNNN GFLRRTRDGHMDDRRDMLFMQNGRKVFKEVLPLVSRHIAEHMEDAGVQADDLKRLWLHQANKTMNDYIGKKVLGRVPEAG EQPNILQDYANTSSAGSIIAFAKYSNDLAPGDTGLICSFGAGYSVGSVILEKTA
Sequences:
>Translated_374_residues MFEPAITGSGVFTPDQSISNDELVVAFNAYADRWNAENAAAIKAGDVDAMAHSSSEFIVAASGIESRYVLDKTGLLDPDI MHPLLPERAMDQPGVMAEMGVDACRKALDMAGVAAGDVDAVICAASNLERAYPAIAIEIQEALGTRGFGFDMNVACSSAT FGIQAAADMIRSGSIQRALVVNPEICSAHLEWRDRDCHFIFGDVATAVLIERSDLAKGEKFIIKSTRCATKFSNNIRNNN GFLRRTRDGHMDDRRDMLFMQNGRKVFKEVLPLVSRHIAEHMEDAGVQADDLKRLWLHQANKTMNDYIGKKVLGRVPEAG EQPNILQDYANTSSAGSIIAFAKYSNDLAPGDTGLICSFGAGYSVGSVILEKTA >Mature_374_residues MFEPAITGSGVFTPDQSISNDELVVAFNAYADRWNAENAAAIKAGDVDAMAHSSSEFIVAASGIESRYVLDKTGLLDPDI MHPLLPERAMDQPGVMAEMGVDACRKALDMAGVAAGDVDAVICAASNLERAYPAIAIEIQEALGTRGFGFDMNVACSSAT FGIQAAADMIRSGSIQRALVVNPEICSAHLEWRDRDCHFIFGDVATAVLIERSDLAKGEKFIIKSTRCATKFSNNIRNNN GFLRRTRDGHMDDRRDMLFMQNGRKVFKEVLPLVSRHIAEHMEDAGVQADDLKRLWLHQANKTMNDYIGKKVLGRVPEAG EQPNILQDYANTSSAGSIIAFAKYSNDLAPGDTGLICSFGAGYSVGSVILEKTA
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=336, Percent_Identity=26.7857142857143, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 40474; Mature: 40474
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPAITGSGVFTPDQSISNDELVVAFNAYADRWNAENAAAIKAGDVDAMAHSSSEFIVA CCCCCCCCCCCCCCCCCCCCCCEEEEEECHHCCCCCCCCEEEECCCCHHHHCCCCCEEEE ASGIESRYVLDKTGLLDPDIMHPLLPERAMDQPGVMAEMGVDACRKALDMAGVAAGDVDA ECCCCCEEEECCCCCCCHHHHHHCCCHHHCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCE VICAASNLERAYPAIAIEIQEALGTRGFGFDMNVACSSATFGIQAAADMIRSGSIQRALV EEEEHHCHHHHCCEEEEEEHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEE VNPEICSAHLEWRDRDCHFIFGDVATAVLIERSDLAKGEKFIIKSTRCATKFSNNIRNNN ECHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHCCCCEEEEECHHHHHHHHHCCCCCC GFLRRTRDGHMDDRRDMLFMQNGRKVFKEVLPLVSRHIAEHMEDAGVQADDLKRLWLHQA CCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NKTMNDYIGKKVLGRVPEAGEQPNILQDYANTSSAGSIIAFAKYSNDLAPGDTGLICSFG CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECC AGYSVGSVILEKTA CCCCHHHHHEECCC >Mature Secondary Structure MFEPAITGSGVFTPDQSISNDELVVAFNAYADRWNAENAAAIKAGDVDAMAHSSSEFIVA CCCCCCCCCCCCCCCCCCCCCCEEEEEECHHCCCCCCCCEEEECCCCHHHHCCCCCEEEE ASGIESRYVLDKTGLLDPDIMHPLLPERAMDQPGVMAEMGVDACRKALDMAGVAAGDVDA ECCCCCEEEECCCCCCCHHHHHHCCCHHHCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCE VICAASNLERAYPAIAIEIQEALGTRGFGFDMNVACSSATFGIQAAADMIRSGSIQRALV EEEEHHCHHHHCCEEEEEEHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEE VNPEICSAHLEWRDRDCHFIFGDVATAVLIERSDLAKGEKFIIKSTRCATKFSNNIRNNN ECHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHCCCCEEEEECHHHHHHHHHCCCCCC GFLRRTRDGHMDDRRDMLFMQNGRKVFKEVLPLVSRHIAEHMEDAGVQADDLKRLWLHQA CCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NKTMNDYIGKKVLGRVPEAGEQPNILQDYANTSSAGSIIAFAKYSNDLAPGDTGLICSFG CCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECC AGYSVGSVILEKTA CCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA