Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055775

Identifier: 89055775

GI number: 89055775

Start: 3336229

End: 3337512

Strand: Direct

Name: 89055775

Synonym: Jann_3284

Alternate gene names: NA

Gene position: 3336229-3337512 (Clockwise)

Preceding gene: 89055774

Following gene: 89055778

Centisome position: 77.26

GC content: 62.93

Gene sequence:

>1284_bases
ATGCCGTTGAAAGACCACCCGCTCCGCTATCAGCTGGCCAATGAGCTGCATGCCCGCCCCTTTCCGACATTGGAATGCCC
GGGACAGGCGGTCTATCTGGCGATCAAGCAACCCAAGGAATCGGCCAAACGCGACCGGGCTCTGGACCGCGCGCACCTGC
TGGCCCTGCTGGACCGGTTCGGCGCACAGCATCCAAGCCCGGACGCCACGCATTACTTTGCCAAACTGGGCCTGTTTCAC
CTGAAATGGGAAAGCCATACGGAATTCGTGACCTATACCGCGTTCATGGAAAACGGTGTGGACCGCCCGTTTGACCCTGC
CGCCTGGGATGTGTTTCCCGACGATTGGCTGGAAGAGGCGCCGGGCGTGCGCATCACCTCGGCCCATATCCGGTTTGCCA
ACGCGCCCCGGGACGAGGATGCCATCACCGATCAGATCAAGGAATGGTTCGTGCCCGAAAGCCTCGCCGCGTCCCGGGTT
CTTGATGATACGGCGATCATCGCAGGCGATTTTCGCATCGACACTGCAGGTCACATGCGGTTCGCGGTGTTCACCAACCC
CGATACCGGCAATCGCCGCATCGGGCGCATTGTCCAGCGGATCTGCGAGATTGAGACCTATAAGGCCATGTCGATGTTGG
GCCTGCCCCGCGCCCGCACCATCTCGCACCGGATGGGAGAGATTGACGCCACCCTCTCGGCCCTGGTCAGCGACCTGTCC
GGCGATCTGACCAAGCCGGATGAGACGCTGTCCGCCCTGCTGACCGCCGCGGCGGAGCTGGAGCAGTTGCAGACCGAAAG
CGCCTTCCGCTTTGGCGCGACCGGGGCTTATGAGGCGCTGGTCAACCAACGGATCGAAGTGCTGCGGGAGGATCGCTTCC
GGGGCCGCCAGACCTTCGGCGAATTCATGATGCGCCGTTTTGATCCGGCCATGCGGACCGTGAAGGCGACGGAGCGGCGG
TTGCAAAGCATGACCGACCGCGCGATCCGGGCGGGCGATCTGTTGCGGACCCGCGTGGACGTCGACCGCTCGGCCCAGAA
CCAGCAATTATTGGAATCGATGGACGCACGATCCGACTTGCAATTGAGGTTGCAAAAGACCGTTGAGGGTCTGTCGATCG
TGGCGATCAGCTATTACGCCGTGTCTCTTGCGGGCTATGTTCTGGCCCCCCTGGCAGATCCCCTGGGGGTGGACGAGGCG
ATCTTGACGGCCATGGCTGTGCTGCCCGTGGTCACCGTCGTGTGGATGGCCCTGCGCGCGATCCGGCGGTCCATCGAGAA
GTAG

Upstream 100 bases:

>100_bases
TGCACCCCGCCAACCCTCTAAAAACATTGGTTTTTTTGGGTTTACACGCGCGCAAATGCCGCTATCTGGGATATATGTAT
CTTTTGGGACGCCCCGCGCC

Downstream 100 bases:

>100_bases
GGCCAGGGACAGGTAGGAATTTCGACGATTTCATCGCCAATCAGCCGGTGCGTTTGTTCCGTCTCCAAACGCTCCTGCGG
CGCGTGGCTCTCCGGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MPLKDHPLRYQLANELHARPFPTLECPGQAVYLAIKQPKESAKRDRALDRAHLLALLDRFGAQHPSPDATHYFAKLGLFH
LKWESHTEFVTYTAFMENGVDRPFDPAAWDVFPDDWLEEAPGVRITSAHIRFANAPRDEDAITDQIKEWFVPESLAASRV
LDDTAIIAGDFRIDTAGHMRFAVFTNPDTGNRRIGRIVQRICEIETYKAMSMLGLPRARTISHRMGEIDATLSALVSDLS
GDLTKPDETLSALLTAAAELEQLQTESAFRFGATGAYEALVNQRIEVLREDRFRGRQTFGEFMMRRFDPAMRTVKATERR
LQSMTDRAIRAGDLLRTRVDVDRSAQNQQLLESMDARSDLQLRLQKTVEGLSIVAISYYAVSLAGYVLAPLADPLGVDEA
ILTAMAVLPVVTVVWMALRAIRRSIEK

Sequences:

>Translated_427_residues
MPLKDHPLRYQLANELHARPFPTLECPGQAVYLAIKQPKESAKRDRALDRAHLLALLDRFGAQHPSPDATHYFAKLGLFH
LKWESHTEFVTYTAFMENGVDRPFDPAAWDVFPDDWLEEAPGVRITSAHIRFANAPRDEDAITDQIKEWFVPESLAASRV
LDDTAIIAGDFRIDTAGHMRFAVFTNPDTGNRRIGRIVQRICEIETYKAMSMLGLPRARTISHRMGEIDATLSALVSDLS
GDLTKPDETLSALLTAAAELEQLQTESAFRFGATGAYEALVNQRIEVLREDRFRGRQTFGEFMMRRFDPAMRTVKATERR
LQSMTDRAIRAGDLLRTRVDVDRSAQNQQLLESMDARSDLQLRLQKTVEGLSIVAISYYAVSLAGYVLAPLADPLGVDEA
ILTAMAVLPVVTVVWMALRAIRRSIEK
>Mature_426_residues
PLKDHPLRYQLANELHARPFPTLECPGQAVYLAIKQPKESAKRDRALDRAHLLALLDRFGAQHPSPDATHYFAKLGLFHL
KWESHTEFVTYTAFMENGVDRPFDPAAWDVFPDDWLEEAPGVRITSAHIRFANAPRDEDAITDQIKEWFVPESLAASRVL
DDTAIIAGDFRIDTAGHMRFAVFTNPDTGNRRIGRIVQRICEIETYKAMSMLGLPRARTISHRMGEIDATLSALVSDLSG
DLTKPDETLSALLTAAAELEQLQTESAFRFGATGAYEALVNQRIEVLREDRFRGRQTFGEFMMRRFDPAMRTVKATERRL
QSMTDRAIRAGDLLRTRVDVDRSAQNQQLLESMDARSDLQLRLQKTVEGLSIVAISYYAVSLAGYVLAPLADPLGVDEAI
LTAMAVLPVVTVVWMALRAIRRSIEK

Specific function: Unknown

COG id: COG4949

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48023; Mature: 47892

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKDHPLRYQLANELHARPFPTLECPGQAVYLAIKQPKESAKRDRALDRAHLLALLDRF
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GAQHPSPDATHYFAKLGLFHLKWESHTEFVTYTAFMENGVDRPFDPAAWDVFPDDWLEEA
CCCCCCCCHHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
PGVRITSAHIRFANAPRDEDAITDQIKEWFVPESLAASRVLDDTAIIAGDFRIDTAGHMR
CCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCEEEECCCCEE
FAVFTNPDTGNRRIGRIVQRICEIETYKAMSMLGLPRARTISHRMGEIDATLSALVSDLS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GDLTKPDETLSALLTAAAELEQLQTESAFRFGATGAYEALVNQRIEVLREDRFRGRQTFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFMMRRFDPAMRTVKATERRLQSMTDRAIRAGDLLRTRVDVDRSAQNQQLLESMDARSDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH
QLRLQKTVEGLSIVAISYYAVSLAGYVLAPLADPLGVDEAILTAMAVLPVVTVVWMALRA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IRRSIEK
HHHHHCC
>Mature Secondary Structure 
PLKDHPLRYQLANELHARPFPTLECPGQAVYLAIKQPKESAKRDRALDRAHLLALLDRF
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GAQHPSPDATHYFAKLGLFHLKWESHTEFVTYTAFMENGVDRPFDPAAWDVFPDDWLEEA
CCCCCCCCHHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
PGVRITSAHIRFANAPRDEDAITDQIKEWFVPESLAASRVLDDTAIIAGDFRIDTAGHMR
CCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCEEEECCCCEE
FAVFTNPDTGNRRIGRIVQRICEIETYKAMSMLGLPRARTISHRMGEIDATLSALVSDLS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GDLTKPDETLSALLTAAAELEQLQTESAFRFGATGAYEALVNQRIEVLREDRFRGRQTFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFMMRRFDPAMRTVKATERRLQSMTDRAIRAGDLLRTRVDVDRSAQNQQLLESMDARSDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH
QLRLQKTVEGLSIVAISYYAVSLAGYVLAPLADPLGVDEAILTAMAVLPVVTVVWMALRA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IRRSIEK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA