| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055717
Identifier: 89055717
GI number: 89055717
Start: 3274227
End: 3275210
Strand: Direct
Name: 89055717
Synonym: Jann_3226
Alternate gene names: NA
Gene position: 3274227-3275210 (Clockwise)
Preceding gene: 89055716
Following gene: 89055720
Centisome position: 75.83
GC content: 55.08
Gene sequence:
>984_bases ATGGACGAAAAACCAAAGGTCAAACGGCGCCGGGGCAAAAAGTTGGAGCGGTGGGAAGTCGCAATTGTCAAAGCCATGAT CGCGCGTGGTGGTCTGCAAGACCAAGACATTCAATCCTACTTCACTCGGCCAAGTCGGACCATAAACCATGCACGTATCA AAGAAATCCGTGATGAAACCAAACATAAGGCGGTCAAACCCGCCGATGACGAAACCCTGGACGCCTTCCTCGGAACTTGG CCCGATGTTGACCCGGATACAGGGCTGAGCCTGCGCGGCGACGAACTCTTGATCAAAGCGCGTGAGGCCATGATCGCCGC CGTGCACGTTTTCAACAGCGCCGGTCTGACATTCCGTGCCGAACTGTTCATCGTGACATCAATCATCGCGTGGACGTATC TGCTGGATGCATGGTTCAAGCGCGAAGGCATTGATTACCACTACCCCGGACAAACAACCGCAGGCGGTGCAGACAAATAT TGGGAACTTGGCAAATGCCTCAAGCATGCAAAGTGCCCCGTGCAAGCGGGGGGCATCAAAAACCTCGAAATGCTCCTCGA ACTCCGTCACGAGATAGAGCACAGGTCGACAAATCGTATCGATGATGCTTTGGGGGCCAAGCTTCAAGCCTGTGCAATCA ATTTCAATGCCGTCCTAAAGGCGGAGTTTGGCGCCCAGCACGGGCTAGAGAAGCGTCTTCCAATTGCGCTCCAATTCGTC GCCTTCGGCGCAGACCAGAGGACCATTCTCAAACGCGCCTCGGATTTGCCTGTGCATTTGGCTGGTGTGATCGATGCCTT TGAATACGGTTTGACTGAAGACCAACTCAAAGACCCTGCCTACCGGTTCAAAGTGGGATTTCTCCCCGTCGCCGCCAAGA AGCCCGGCGCCGCCGACGCCGCCGTCGAAATCGTTTCTCCGGGCTCCGAAGATGCGGCGGAGATTGAGCGGATCATCTTC AAAGACCGAGAACGCAACAGATAG
Upstream 100 bases:
>100_bases TGAAGAGCGCATTGGAGCGTTGTTGCGGGACATGGTCGAATTAGGCATCGCCCGCGCCGACACCGAGCGCGCGGGCCGAT TCTTCTTGCCGGAGTAACCC
Downstream 100 bases:
>100_bases CCGTGGTCAATTCGGTCATACGCCTTGAGGTCAAACGAGACATCGCGCCCATCGTCAGTCCGGACCGACATGCTCTGCGC GCTGACCTCATGAATGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDEKPKVKRRRGKKLERWEVAIVKAMIARGGLQDQDIQSYFTRPSRTINHARIKEIRDETKHKAVKPADDETLDAFLGTW PDVDPDTGLSLRGDELLIKAREAMIAAVHVFNSAGLTFRAELFIVTSIIAWTYLLDAWFKREGIDYHYPGQTTAGGADKY WELGKCLKHAKCPVQAGGIKNLEMLLELRHEIEHRSTNRIDDALGAKLQACAINFNAVLKAEFGAQHGLEKRLPIALQFV AFGADQRTILKRASDLPVHLAGVIDAFEYGLTEDQLKDPAYRFKVGFLPVAAKKPGAADAAVEIVSPGSEDAAEIERIIF KDRERNR
Sequences:
>Translated_327_residues MDEKPKVKRRRGKKLERWEVAIVKAMIARGGLQDQDIQSYFTRPSRTINHARIKEIRDETKHKAVKPADDETLDAFLGTW PDVDPDTGLSLRGDELLIKAREAMIAAVHVFNSAGLTFRAELFIVTSIIAWTYLLDAWFKREGIDYHYPGQTTAGGADKY WELGKCLKHAKCPVQAGGIKNLEMLLELRHEIEHRSTNRIDDALGAKLQACAINFNAVLKAEFGAQHGLEKRLPIALQFV AFGADQRTILKRASDLPVHLAGVIDAFEYGLTEDQLKDPAYRFKVGFLPVAAKKPGAADAAVEIVSPGSEDAAEIERIIF KDRERNR >Mature_327_residues MDEKPKVKRRRGKKLERWEVAIVKAMIARGGLQDQDIQSYFTRPSRTINHARIKEIRDETKHKAVKPADDETLDAFLGTW PDVDPDTGLSLRGDELLIKAREAMIAAVHVFNSAGLTFRAELFIVTSIIAWTYLLDAWFKREGIDYHYPGQTTAGGADKY WELGKCLKHAKCPVQAGGIKNLEMLLELRHEIEHRSTNRIDDALGAKLQACAINFNAVLKAEFGAQHGLEKRLPIALQFV AFGADQRTILKRASDLPVHLAGVIDAFEYGLTEDQLKDPAYRFKVGFLPVAAKKPGAADAAVEIVSPGSEDAAEIERIIF KDRERNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36613; Mature: 36613
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKPKVKRRRGKKLERWEVAIVKAMIARGGLQDQDIQSYFTRPSRTINHARIKEIRDET CCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH KHKAVKPADDETLDAFLGTWPDVDPDTGLSLRGDELLIKAREAMIAAVHVFNSAGLTFRA HHCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEH ELFIVTSIIAWTYLLDAWFKREGIDYHYPGQTTAGGADKYWELGKCLKHAKCPVQAGGIK HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH NLEMLLELRHEIEHRSTNRIDDALGAKLQACAINFNAVLKAEFGAQHGLEKRLPIALQFV HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHEEECHHHEEEEHHCHHCCCCCCCCCEEEEE AFGADQRTILKRASDLPVHLAGVIDAFEYGLTEDQLKDPAYRFKVGFLPVAAKKPGAADA HCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCHHEEEEEEEEEECCCCCCCCC AVEIVSPGSEDAAEIERIIFKDRERNR EEEEECCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDEKPKVKRRRGKKLERWEVAIVKAMIARGGLQDQDIQSYFTRPSRTINHARIKEIRDET CCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH KHKAVKPADDETLDAFLGTWPDVDPDTGLSLRGDELLIKAREAMIAAVHVFNSAGLTFRA HHCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEH ELFIVTSIIAWTYLLDAWFKREGIDYHYPGQTTAGGADKYWELGKCLKHAKCPVQAGGIK HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH NLEMLLELRHEIEHRSTNRIDDALGAKLQACAINFNAVLKAEFGAQHGLEKRLPIALQFV HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHEEECHHHEEEEHHCHHCCCCCCCCCEEEEE AFGADQRTILKRASDLPVHLAGVIDAFEYGLTEDQLKDPAYRFKVGFLPVAAKKPGAADA HCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCHHEEEEEEEEEECCCCCCCCC AVEIVSPGSEDAAEIERIIFKDRERNR EEEEECCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA