| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yeeA [H]
Identifier: 89055716
GI number: 89055716
Start: 3271614
End: 3274223
Strand: Direct
Name: yeeA [H]
Synonym: Jann_3225
Alternate gene names: 89055716
Gene position: 3271614-3274223 (Clockwise)
Preceding gene: 89055715
Following gene: 89055717
Centisome position: 75.77
GC content: 58.54
Gene sequence:
>2610_bases GTGGCGTCGCAGCGCTCTTGGCAAGATGTGGAACCCGCCATCTTTGGCACTCTTTTGGAACGCGCCCTCAATCCTCGCGA GCGCGGCAAGCTCGGCGCCCATTTCACCCCGCGTGTTTACGTCGAGAGACTGGTGATCCCGACGATCATTCAACCTCTGC GCGCAGATTGGGACGTCGCAAAACAACGCGCAAAAGAGCTTGAAGAGGACGATCAGCCTTCGGAGGCGTTGAAGGTCATC CGTGATTTTCACAGAGCCCTCTGTTCTACGCGGGTTCTTGACCCGGCCTGTGGGACCGGCAACTTTCTCTACGTCTCACT CGAGATGATGAAGAGGCTCGAAGGTGAAGTCTTGGAAGTGCTTTTTCACCTTCAGCAGGAGGTTCAAGGAGGAGAGCAAG AGGGGTTGGACCTTGGCGGTGCAACCGTAAACCCTCAACAATTCTATGGGATCGAGCTCAACCCTCGCGCCGTGCCGATT GCGGACCTCGTGCTTTGGATCGGGTATCTGAAATGGCAACTCCGCACCTCGGGGCCTGCGTCGATTGCGGAGCCGATCCT GCACGCCTACGGCACAATCCGCGAAGGGGACGCCATCCTCGACAGCGAAGGCACCGAACCAGTGCTGGACGATGCAGGCC AACCCAAACGGGTCTGGGACCGGTTCTCGATGAAACCAAACCCGGTTGCGCCCGAACAATCCATTCCCGACCCGACCATA ACCATCGAGATGGTGCGCTACATCAAGCCCAAACCGGCGCCATGGCCGGAGGTGGAGTTTATTGTCGGAAATCCTCCATT CATCGGGGGGAAAGACATGCGGGGAGAGCTGGGCGACGGATACACAGAAGCGGTCTGGAAAGCGCGCAAGGATGTGCCGG GTGGTGCTGATTTTGTGATGCATTTCTGGGATGCAGCGGCGGAGCGGCTGCAAGCGAAGGGCACCAAGGCCAAGCCCAAC CCGCTGCGCCGCTTTGGCTTCATTACAACCAACTCCATCACGCAAACCTTTTCGCGCCGGGTCATCGAACACCACCTCAA GGCGAAGGCCCCTTTGAGCCTCGTCTACGCCGTACCCGATCATCCATGGATGAAGGCCAGCGACAAGGCGGCCGTGCGCA TCGCCATGACGGTCGCAGAGCCAGGGGAAAGCGAGGGCGTTTTGGCCGAGGTGGTGGCCGAGGCCGATCTAAACACCGAC ACGCCCAAAGTAGACCTCCGCAAGGCCGAAGGAAAAGTAACCGCAAAACTGACGTTGGGCGCCGATCTTTCCCGCATGCG CCCGCTGTGGTCCCAAAAAGCACTTGGGCACAAAGGCTTTATGCCATACGGAAAAGCATTCTGGGTTGACGCTCAAAGAG CGCGAGCGTTCGGTCTAGGCCGTACTGAAAATGCCGAAAATTACATAAAACCCTACATCAATGGTCGAGATCTGAACCAA CATTCACGAGGGAAATTGGTATTGGATTTTCACGGTCTGAATGACAAGGAAGTCGCCGAGCGGTTCCCTGCCGCCTACCA GCACTTGGCCGAATTTTCTCGGCCAGTGCGGGCGACCGACAATATGGAATACCGACGTAAAAACTGGTGGCTTTTTGGTC AGCCATCCACGGAAATGCGCTCTGCGCTGCAGGGCATCGACCGCTTTATCGCGACCACTGAAACGGCACGTCATCGCTTG TTTTCGTTCTTGGATGGCGCAGCGATGCCGGATCAGAAAATTCGGGTCGTCGCGGTGCCTCAACCGGAATTCTTAACCAT TTTGACTTCACGAGTTCACACTTGGTTTTCATTCGAGACTGGAGGTTGGCAAGGAGCAGGAAACGACCCGGTCTACCAAC ACACGCAGACCTTCGATCCCTTCCCATTCCCCGCGCTCACCGACGCAGCCCAATCCAAACTGGCGGATCTCGGCGAGCGG CTCGACGCATTCCGAAAATGGCGCATCGCAGACCATGACCATCTGACCATGACGGGGCTCTACAACGCCCTTGAACGCCT GCGAGAATTGGAAGCCGGGATCGGCGATGCAATGACCGATGCCGAACGCGACGTCTACGACGCGGCCCAAATTCGCATTC TGGCCGAGTTGCATGACGAGATCGACCGTGCGGTCCTTGACGCCTACGGCTGGTCCGACCTCGCGCACGCTCTGATTGGC AAGATCGGCGGCACGATCCCAAGCCTGCATAAGACACCCGAACAGGAAGAGGCCGAAGAAGAGCTTCTGACGCGCCTCGT CTCACTGAACGAAGAGCGCGCGGCGGAAGAGGCACGCGGCGAAATCAGTTGGCTGCGTCCCGACTTTCAAATCCCAAAAC TGAGCAAGAAGGCGCCGCAACCGGCCATGGATGTGGCGACCAATGCCGCCATTGTCATACCGGCCGCAGAGAAGCCCAGT TGGCCCAAAGAGCCAATGGACCAAATCCGCATCTTGCGCACAGCGATGCAGGGCGCCACGACGCCGATGTCCCCCGGCGA TCTTTCCGCGCGGTTCCGCGGCGGCAGGAAACGTGAAGAGCGCATTGGAGCGTTGTTGCGGGACATGGTCGAATTAGGCA TCGCCCGCGCCGACACCGAGCGCGCGGGCCGATTCTTCTTGCCGGAGTAA
Upstream 100 bases:
>100_bases CGCAGCGGGCATCAACAAGACCCTCAAACGGTTCAATGGCTCGCTGTTTAACGACGCCCGCGCCCTCCCACTCGATGAAG ACGACATTCGGGAGCTTTGG
Downstream 100 bases:
>100_bases CCCATGGACGAAAAACCAAAGGTCAAACGGCGCCGGGGCAAAAAGTTGGAGCGGTGGGAAGTCGCAATTGTCAAAGCCAT GATCGCGCGTGGTGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Modification methylase BsuMORF677P; M.BsuMORF677P [H]
Number of amino acids: Translated: 869; Mature: 868
Protein sequence:
>869_residues MASQRSWQDVEPAIFGTLLERALNPRERGKLGAHFTPRVYVERLVIPTIIQPLRADWDVAKQRAKELEEDDQPSEALKVI RDFHRALCSTRVLDPACGTGNFLYVSLEMMKRLEGEVLEVLFHLQQEVQGGEQEGLDLGGATVNPQQFYGIELNPRAVPI ADLVLWIGYLKWQLRTSGPASIAEPILHAYGTIREGDAILDSEGTEPVLDDAGQPKRVWDRFSMKPNPVAPEQSIPDPTI TIEMVRYIKPKPAPWPEVEFIVGNPPFIGGKDMRGELGDGYTEAVWKARKDVPGGADFVMHFWDAAAERLQAKGTKAKPN PLRRFGFITTNSITQTFSRRVIEHHLKAKAPLSLVYAVPDHPWMKASDKAAVRIAMTVAEPGESEGVLAEVVAEADLNTD TPKVDLRKAEGKVTAKLTLGADLSRMRPLWSQKALGHKGFMPYGKAFWVDAQRARAFGLGRTENAENYIKPYINGRDLNQ HSRGKLVLDFHGLNDKEVAERFPAAYQHLAEFSRPVRATDNMEYRRKNWWLFGQPSTEMRSALQGIDRFIATTETARHRL FSFLDGAAMPDQKIRVVAVPQPEFLTILTSRVHTWFSFETGGWQGAGNDPVYQHTQTFDPFPFPALTDAAQSKLADLGER LDAFRKWRIADHDHLTMTGLYNALERLRELEAGIGDAMTDAERDVYDAAQIRILAELHDEIDRAVLDAYGWSDLAHALIG KIGGTIPSLHKTPEQEEAEEELLTRLVSLNEERAAEEARGEISWLRPDFQIPKLSKKAPQPAMDVATNAAIVIPAAEKPS WPKEPMDQIRILRTAMQGATTPMSPGDLSARFRGGRKREERIGALLRDMVELGIARADTERAGRFFLPE
Sequences:
>Translated_869_residues MASQRSWQDVEPAIFGTLLERALNPRERGKLGAHFTPRVYVERLVIPTIIQPLRADWDVAKQRAKELEEDDQPSEALKVI RDFHRALCSTRVLDPACGTGNFLYVSLEMMKRLEGEVLEVLFHLQQEVQGGEQEGLDLGGATVNPQQFYGIELNPRAVPI ADLVLWIGYLKWQLRTSGPASIAEPILHAYGTIREGDAILDSEGTEPVLDDAGQPKRVWDRFSMKPNPVAPEQSIPDPTI TIEMVRYIKPKPAPWPEVEFIVGNPPFIGGKDMRGELGDGYTEAVWKARKDVPGGADFVMHFWDAAAERLQAKGTKAKPN PLRRFGFITTNSITQTFSRRVIEHHLKAKAPLSLVYAVPDHPWMKASDKAAVRIAMTVAEPGESEGVLAEVVAEADLNTD TPKVDLRKAEGKVTAKLTLGADLSRMRPLWSQKALGHKGFMPYGKAFWVDAQRARAFGLGRTENAENYIKPYINGRDLNQ HSRGKLVLDFHGLNDKEVAERFPAAYQHLAEFSRPVRATDNMEYRRKNWWLFGQPSTEMRSALQGIDRFIATTETARHRL FSFLDGAAMPDQKIRVVAVPQPEFLTILTSRVHTWFSFETGGWQGAGNDPVYQHTQTFDPFPFPALTDAAQSKLADLGER LDAFRKWRIADHDHLTMTGLYNALERLRELEAGIGDAMTDAERDVYDAAQIRILAELHDEIDRAVLDAYGWSDLAHALIG KIGGTIPSLHKTPEQEEAEEELLTRLVSLNEERAAEEARGEISWLRPDFQIPKLSKKAPQPAMDVATNAAIVIPAAEKPS WPKEPMDQIRILRTAMQGATTPMSPGDLSARFRGGRKREERIGALLRDMVELGIARADTERAGRFFLPE >Mature_868_residues ASQRSWQDVEPAIFGTLLERALNPRERGKLGAHFTPRVYVERLVIPTIIQPLRADWDVAKQRAKELEEDDQPSEALKVIR DFHRALCSTRVLDPACGTGNFLYVSLEMMKRLEGEVLEVLFHLQQEVQGGEQEGLDLGGATVNPQQFYGIELNPRAVPIA DLVLWIGYLKWQLRTSGPASIAEPILHAYGTIREGDAILDSEGTEPVLDDAGQPKRVWDRFSMKPNPVAPEQSIPDPTIT IEMVRYIKPKPAPWPEVEFIVGNPPFIGGKDMRGELGDGYTEAVWKARKDVPGGADFVMHFWDAAAERLQAKGTKAKPNP LRRFGFITTNSITQTFSRRVIEHHLKAKAPLSLVYAVPDHPWMKASDKAAVRIAMTVAEPGESEGVLAEVVAEADLNTDT PKVDLRKAEGKVTAKLTLGADLSRMRPLWSQKALGHKGFMPYGKAFWVDAQRARAFGLGRTENAENYIKPYINGRDLNQH SRGKLVLDFHGLNDKEVAERFPAAYQHLAEFSRPVRATDNMEYRRKNWWLFGQPSTEMRSALQGIDRFIATTETARHRLF SFLDGAAMPDQKIRVVAVPQPEFLTILTSRVHTWFSFETGGWQGAGNDPVYQHTQTFDPFPFPALTDAAQSKLADLGERL DAFRKWRIADHDHLTMTGLYNALERLRELEAGIGDAMTDAERDVYDAAQIRILAELHDEIDRAVLDAYGWSDLAHALIGK IGGTIPSLHKTPEQEEAEEELLTRLVSLNEERAAEEARGEISWLRPDFQIPKLSKKAPQPAMDVATNAAIVIPAAEKPSW PKEPMDQIRILRTAMQGATTPMSPGDLSARFRGGRKREERIGALLRDMVELGIARADTERAGRFFLPE
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97346; Mature: 97215
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQRSWQDVEPAIFGTLLERALNPRERGKLGAHFTPRVYVERLVIPTIIQPLRADWDVA CCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH KQRAKELEEDDQPSEALKVIRDFHRALCSTRVLDPACGTGNFLYVSLEMMKRLEGEVLEV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHH LFHLQQEVQGGEQEGLDLGGATVNPQQFYGIELNPRAVPIADLVLWIGYLKWQLRTSGPA HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCH SIAEPILHAYGTIREGDAILDSEGTEPVLDDAGQPKRVWDRFSMKPNPVAPEQSIPDPTI HHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCE TIEMVRYIKPKPAPWPEVEFIVGNPPFIGGKDMRGELGDGYTEAVWKARKDVPGGADFVM EHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH HFWDAAAERLQAKGTKAKPNPLRRFGFITTNSITQTFSRRVIEHHLKAKAPLSLVYAVPD HHHHHHHHHHHHCCCCCCCCHHHHHCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC HPWMKASDKAAVRIAMTVAEPGESEGVLAEVVAEADLNTDTPKVDLRKAEGKVTAKLTLG CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEC ADLSRMRPLWSQKALGHKGFMPYGKAFWVDAQRARAFGLGRTENAENYIKPYINGRDLNQ CCHHHHCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC HSRGKLVLDFHGLNDKEVAERFPAAYQHLAEFSRPVRATDNMEYRRKNWWLFGQPSTEMR CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHH SALQGIDRFIATTETARHRLFSFLDGAAMPDQKIRVVAVPQPEFLTILTSRVHTWFSFET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECC GGWQGAGNDPVYQHTQTFDPFPFPALTDAAQSKLADLGERLDAFRKWRIADHDHLTMTGL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH YNALERLRELEAGIGDAMTDAERDVYDAAQIRILAELHDEIDRAVLDAYGWSDLAHALIG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KIGGTIPSLHKTPEQEEAEEELLTRLVSLNEERAAEEARGEISWLRPDFQIPKLSKKAPQ HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCC PAMDVATNAAIVIPAAEKPSWPKEPMDQIRILRTAMQGATTPMSPGDLSARFRGGRKREE CHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHH RIGALLRDMVELGIARADTERAGRFFLPE HHHHHHHHHHHHHHHHCCHHHCCCCCCCC >Mature Secondary Structure ASQRSWQDVEPAIFGTLLERALNPRERGKLGAHFTPRVYVERLVIPTIIQPLRADWDVA CCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH KQRAKELEEDDQPSEALKVIRDFHRALCSTRVLDPACGTGNFLYVSLEMMKRLEGEVLEV HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHH LFHLQQEVQGGEQEGLDLGGATVNPQQFYGIELNPRAVPIADLVLWIGYLKWQLRTSGPA HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCH SIAEPILHAYGTIREGDAILDSEGTEPVLDDAGQPKRVWDRFSMKPNPVAPEQSIPDPTI HHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCE TIEMVRYIKPKPAPWPEVEFIVGNPPFIGGKDMRGELGDGYTEAVWKARKDVPGGADFVM EHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH HFWDAAAERLQAKGTKAKPNPLRRFGFITTNSITQTFSRRVIEHHLKAKAPLSLVYAVPD HHHHHHHHHHHHCCCCCCCCHHHHHCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC HPWMKASDKAAVRIAMTVAEPGESEGVLAEVVAEADLNTDTPKVDLRKAEGKVTAKLTLG CCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEC ADLSRMRPLWSQKALGHKGFMPYGKAFWVDAQRARAFGLGRTENAENYIKPYINGRDLNQ CCHHHHCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC HSRGKLVLDFHGLNDKEVAERFPAAYQHLAEFSRPVRATDNMEYRRKNWWLFGQPSTEMR CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCHHHH SALQGIDRFIATTETARHRLFSFLDGAAMPDQKIRVVAVPQPEFLTILTSRVHTWFSFET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECC GGWQGAGNDPVYQHTQTFDPFPFPALTDAAQSKLADLGERLDAFRKWRIADHDHLTMTGL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH YNALERLRELEAGIGDAMTDAERDVYDAAQIRILAELHDEIDRAVLDAYGWSDLAHALIG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KIGGTIPSLHKTPEQEEAEEELLTRLVSLNEERAAEEARGEISWLRPDFQIPKLSKKAPQ HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCC PAMDVATNAAIVIPAAEKPSWPKEPMDQIRILRTAMQGATTPMSPGDLSARFRGGRKREE CHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHH RIGALLRDMVELGIARADTERAGRFFLPE HHHHHHHHHHHHHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]