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The map label for this gene is sdiA [C]

Identifier: 89055684

GI number: 89055684

Start: 3235049

End: 3235780

Strand: Direct

Name: sdiA [C]

Synonym: Jann_3193

Alternate gene names: 89055684

Gene position: 3235049-3235780 (Clockwise)

Preceding gene: 89055682

Following gene: 89055685

Centisome position: 74.92

GC content: 60.38

Gene sequence:

>732_bases
ATGATCCAAAGGCTGCAAGACTTCTCGGAAGACATCATTGGCATGACCGGACCCCGCGCGGTGTGGGCCGGAATGGCGCA
TCTGGCCGATGATCTGGGGATGCCGTTTTGCACGCTGACCATGGCCCGGCGCGCGCCTGATCTGCGATCATCGCAATTCA
TCACCAACCTGCCCGCGCCGTTTCAAGACACGTATTGCGAAGGGGGGTTCATTAACGACGACCCGTTCTTGTCCCTCATC
TGCCGCGACATGACCGCCGCTGGATTCATGACGGACCCCGACGATTTGCCAGAAGCGGATCAACGACAGGGTGCCTTTCT
GGATCTCACCCGCTCCTTTGGTGTTGGCACGGCGCTGTGCATCCCCGTCCGCACCACCCGACAATCGGAGTTTGGAGGTT
GGGTGATCGGCGGCGACCTGCGGGCACGCGATGTCGCGGATGGGCGAGAGATCGCGGCCATGCAATTGCAGCTGGCAGGC
TTGATCGCGTTTGAACGGTTGAGCGTCCTGACCCGGCAAGCCAACCACGCCCATAGACGGCTCAGCCCGAGAGAGAGGGA
ATGCCTCCAATGGCTCAGCGCCGGATTGCGGGTCACGCAAATTGCGCACCGCCTGGATATTTCGGAATCCGCCGTTCATC
TCTACATCAAGAATGCACGTCGCAAATTTGGCGCAAGGACGCGCGAACAGGCCGTCGCCCATGCGATTGTGAGCGGAGAG
ATTGAACTCTGA

Upstream 100 bases:

>100_bases
AGGACGAACGGTGTCTTCTGTCCATGCCGCTTGCCGCGATTATTGTGAATATGGCGATTTTCATATAGTGTCAGCGGCAA
GATGCGGAGGCTGACGGGCC

Downstream 100 bases:

>100_bases
ACACGCGGCAGGTCACAAAGCAGCACCGGGTCAGGACCCTGCGCGCCAAAGAATACCTGTCCGCTCAATAATGTGATGCG
GTGTTTTCGCCGTCACCTGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; ATP-Dependent Transcription Regulator LuxR

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQFITNLPAPFQDTYCEGGFINDDPFLSLI
CRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALCIPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAG
LIAFERLSVLTRQANHAHRRLSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGE
IEL

Sequences:

>Translated_243_residues
MIQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQFITNLPAPFQDTYCEGGFINDDPFLSLI
CRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALCIPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAG
LIAFERLSVLTRQANHAHRRLSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGE
IEL
>Mature_243_residues
MIQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQFITNLPAPFQDTYCEGGFINDDPFLSLI
CRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALCIPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAG
LIAFERLSVLTRQANHAHRRLSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGE
IEL

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26985; Mature: 26985

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQFITNLPAP
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCC
FQDTYCEGGFINDDPFLSLICRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALC
CCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEHHHHCCCCEEEE
IPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAGLIAFERLSVLTRQANHAHRR
EECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGE
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
IEL
CCC
>Mature Secondary Structure
MIQRLQDFSEDIIGMTGPRAVWAGMAHLADDLGMPFCTLTMARRAPDLRSSQFITNLPAP
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCCCCC
FQDTYCEGGFINDDPFLSLICRDMTAAGFMTDPDDLPEADQRQGAFLDLTRSFGVGTALC
CCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEHHHHCCCCEEEE
IPVRTTRQSEFGGWVIGGDLRARDVADGREIAAMQLQLAGLIAFERLSVLTRQANHAHRR
EECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSPRERECLQWLSAGLRVTQIAHRLDISESAVHLYIKNARRKFGARTREQAVAHAIVSGE
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
IEL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA