| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055635
Identifier: 89055635
GI number: 89055635
Start: 3183580
End: 3184704
Strand: Direct
Name: 89055635
Synonym: Jann_3144
Alternate gene names: NA
Gene position: 3183580-3184704 (Clockwise)
Preceding gene: 89055634
Following gene: 89055636
Centisome position: 73.73
GC content: 67.56
Gene sequence:
>1125_bases ATGACCTTTCTTCTCCGCACCCTTTGCGCCGTGATCGGTGCTGCTTTCTTGTTTGCCGTGGCCAATCTGGCACTGTCGGG CCTGCCGTCAGACGCGCCGCCGGTGGCACTTGCCTCCGACGCCGCGACGCGCGCGCCGGGCACGCTGCGCGATGTGCCGC AACCGCTCCTCGGCGGGGCCTCCTCGCAGGTTTACCCAGCCGCCGCGCCCTCCGCGCTGGCCCAGGGGATTGAGGCCGAC TGGCGCGATTGGGCGGCGACCCATGGCATTGCTGAGGGCGCGTTGGTCGTGCTGTTTCCAAACGGCACGATGCACCGCGT CGCGATGGAGCGCGCCACAACGACCTCCGTCCCCGTCGCCAGCCTGTCGAAGGCCATCACTGGCATCTGCCTGGATATTG TGCTGCGCGAACAGGGGCTAAGCTGGTACACGTCGCTGGGGGATATCGCGCCGCAGATGTCCGACGTGCGCGTCACGCCA CAGCGCTGGAACGACCGCATTACGCTGGCGGCGCTGGCCAACCACACCTCCGGCCTCGCGCCGGACCTCACGCAGGGCAC CATGGGCAGCACGCTGCACGGCGCGCTTGGCCTGCACCGCCGCATCGCGTCCGAAGCCCTGCGCGAAGAAAACATGCAGG GCACCGCGCGGGATTATGTCTATAGCAACACCAACTACGCCGTCCTGGGCGTCGTGATTGAGGCATTGACCGGCCAATCC TACAGCGATGCCTGCCTGGACCGGGTCATCGCGCCTGCGGGCATCACCGATGCCGTGATCCACGGGGCCATGGGCTCCCG CTCCTCCTTCGCCGGGTGGGAGATGTCGGCAGAAGCCTACGCGCGGCTGGCGCAGCATTGGTTCTCAGGCACCGCCACTG ATCTGGTCGCGCGCCCGTTTGATCGCCCCATGCACAACAATTACTCCATCGGCTACGTCATCCACGGGCGCGGGGACGCG GCTCAGGTCTCCCACGCGGGTCACTTCTGCAACCGGGATGGGACAGGCACCGGCGCGTATTTCCACGCGCGCGGCGACGG GGTGGTTGTGTCCGCCAATTGGTCCGGCGGCTGCGTCTCCGCCACCGATACCGGGCTTGACGTCGCCATCGCCAACCGGA TGTGA
Upstream 100 bases:
>100_bases ATCTTCCGGCGCGGAAACGACCCATAACGCCCAATCCCGGCCCTAATTCTGACGCCATCCCCTGCCACACAGGCGCCAAC TTGAACTGGCCGGGCGTCCC
Downstream 100 bases:
>100_bases CACCACGATTGTCTGTGGGGGCACTGGCCTTGCGCGGACCGCGGCGTTAAAGCTGCGCGCAACCGCATGCTTTGAAAGCC CGTTTCGATGTCCACCACCT
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTFLLRTLCAVIGAAFLFAVANLALSGLPSDAPPVALASDAATRAPGTLRDVPQPLLGGASSQVYPAAAPSALAQGIEAD WRDWAATHGIAEGALVVLFPNGTMHRVAMERATTTSVPVASLSKAITGICLDIVLREQGLSWYTSLGDIAPQMSDVRVTP QRWNDRITLAALANHTSGLAPDLTQGTMGSTLHGALGLHRRIASEALREENMQGTARDYVYSNTNYAVLGVVIEALTGQS YSDACLDRVIAPAGITDAVIHGAMGSRSSFAGWEMSAEAYARLAQHWFSGTATDLVARPFDRPMHNNYSIGYVIHGRGDA AQVSHAGHFCNRDGTGTGAYFHARGDGVVVSANWSGGCVSATDTGLDVAIANRM
Sequences:
>Translated_374_residues MTFLLRTLCAVIGAAFLFAVANLALSGLPSDAPPVALASDAATRAPGTLRDVPQPLLGGASSQVYPAAAPSALAQGIEAD WRDWAATHGIAEGALVVLFPNGTMHRVAMERATTTSVPVASLSKAITGICLDIVLREQGLSWYTSLGDIAPQMSDVRVTP QRWNDRITLAALANHTSGLAPDLTQGTMGSTLHGALGLHRRIASEALREENMQGTARDYVYSNTNYAVLGVVIEALTGQS YSDACLDRVIAPAGITDAVIHGAMGSRSSFAGWEMSAEAYARLAQHWFSGTATDLVARPFDRPMHNNYSIGYVIHGRGDA AQVSHAGHFCNRDGTGTGAYFHARGDGVVVSANWSGGCVSATDTGLDVAIANRM >Mature_373_residues TFLLRTLCAVIGAAFLFAVANLALSGLPSDAPPVALASDAATRAPGTLRDVPQPLLGGASSQVYPAAAPSALAQGIEADW RDWAATHGIAEGALVVLFPNGTMHRVAMERATTTSVPVASLSKAITGICLDIVLREQGLSWYTSLGDIAPQMSDVRVTPQ RWNDRITLAALANHTSGLAPDLTQGTMGSTLHGALGLHRRIASEALREENMQGTARDYVYSNTNYAVLGVVIEALTGQSY SDACLDRVIAPAGITDAVIHGAMGSRSSFAGWEMSAEAYARLAQHWFSGTATDLVARPFDRPMHNNYSIGYVIHGRGDAA QVSHAGHFCNRDGTGTGAYFHARGDGVVVSANWSGGCVSATDTGLDVAIANRM
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39207; Mature: 39075
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLLRTLCAVIGAAFLFAVANLALSGLPSDAPPVALASDAATRAPGTLRDVPQPLLGGA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHCCC SSQVYPAAAPSALAQGIEADWRDWAATHGIAEGALVVLFPNGTMHRVAMERATTTSVPVA CCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHH SLSKAITGICLDIVLREQGLSWYTSLGDIAPQMSDVRVTPQRWNDRITLAALANHTSGLA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECHHHCCCCEEEEEECCCCCCCC PDLTQGTMGSTLHGALGLHRRIASEALREENMQGTARDYVYSNTNYAVLGVVIEALTGQS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEHHHHHHHHHCCCC YSDACLDRVIAPAGITDAVIHGAMGSRSSFAGWEMSAEAYARLAQHWFSGTATDLVARPF HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC DRPMHNNYSIGYVIHGRGDAAQVSHAGHFCNRDGTGTGAYFHARGDGVVVSANWSGGCVS CCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEC ATDTGLDVAIANRM CCCCCCEEEEECCC >Mature Secondary Structure TFLLRTLCAVIGAAFLFAVANLALSGLPSDAPPVALASDAATRAPGTLRDVPQPLLGGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHCCC SSQVYPAAAPSALAQGIEADWRDWAATHGIAEGALVVLFPNGTMHRVAMERATTTSVPVA CCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHH SLSKAITGICLDIVLREQGLSWYTSLGDIAPQMSDVRVTPQRWNDRITLAALANHTSGLA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECHHHCCCCEEEEEECCCCCCCC PDLTQGTMGSTLHGALGLHRRIASEALREENMQGTARDYVYSNTNYAVLGVVIEALTGQS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEHHHHHHHHHCCCC YSDACLDRVIAPAGITDAVIHGAMGSRSSFAGWEMSAEAYARLAQHWFSGTATDLVARPF HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCC DRPMHNNYSIGYVIHGRGDAAQVSHAGHFCNRDGTGTGAYFHARGDGVVVSANWSGGCVS CCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEC ATDTGLDVAIANRM CCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA