| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055540
Identifier: 89055540
GI number: 89055540
Start: 3079781
End: 3080854
Strand: Direct
Name: 89055540
Synonym: Jann_3049
Alternate gene names: NA
Gene position: 3079781-3080854 (Clockwise)
Preceding gene: 89055538
Following gene: 89055541
Centisome position: 71.32
GC content: 61.45
Gene sequence:
>1074_bases ATGAAGCAATTTGAGGAACTTGTGCGACGGGCGACTGAGACCGGAGGCTACCTTGCTGCCGGAGTATCGCGATTGCACAC CGGCGAACCGGCCCAGACAATGCTGAGGGGGCGCCTGCATCCGTCTGATCCCGCTGGTGATCTTGATCCGGAACTAAGGA TGCGATGTGCCTCCATTACTAAGGCCGCGACGGCGCGCTTAGCTTGTGAACTGGCCGTTCTGGGCCAGATTGACCTCGCA TCACCCATTGCCCGTCTGCTGCCAGACGTCGATGACGCGATCACCTTCGACATGTTGCTAAGCCACACGTCCGGCCTTCG CGATACTGACGGATACCTGACCCCGGCGGGCGTCTCGCCAACGCAGTTGGCACATCCGCCCGCGACGACGCCCGGCACAT TCTTTCACTACGCCAACCTCAACTATGTCCTGCTTGGCGCGGGGCTTGAGGCCGCGACGCAGGCCCGGTTCGATCATCTG TTGAACGATCACGTCCTGCGGCCAGCCAAAATCGATGGCGGACTGAATTGGGCAGGCGTTGCAGATCGCCGTCCTTTACC GCTATTCCAGCGCATTGACGGGGCGTTGTCGCTTGTCGTGGATGGGCCGGATGCGGATTGGAGCGCCGACCTGATCTGGG CAGAGGGACGCGGTTTTGAGCTGGAGACTTACCAGCTTGTGCGCGACACCTGCCTGATGTCCCCTCACGCAGGTCTGCGT TTGTCATTGCCGGAAATGGCCAGGCTTGCGCGCCATTTGGGTGCGGATAGCGAGGCCGCAATCCTGCAGCGCGACGTGCT TTGGCGGTACAACGGCAGAAACGGAGACGGGTGCAACGGACTCTTTCCGGCTTTCGGACGCGGCGTCACGATATTTGAAA GTCATGCGCAGATCCCCGGACCATTGATCGGCCACGCCGGGCACGCCCTGGGCTTTTCCGGGGGCGCATGGTGGAACCCG CAAACGGGCGTGGCCCATGCCTATGCCCTGACGGGGGCCGCCGATGAAACCTTGGCCAACGGAGACGAACCTTTCTTCCC GGAAACCGAATTGCACCTTCTTCGCCTGTTCTGA
Upstream 100 bases:
>100_bases GGATTTAGGCCGCAACACCATCGTGGGTGCGAGAGCATTCGGTTATCGTAAATCCAAATGGTCCGGGACTCAAATGCTCT GAACCAACGAAGGATGTTAG
Downstream 100 bases:
>100_bases TGATATGCGGTCAGCGGCTTATCGCCGATACCGCTGCCTGACCCGAAGTCAAATTGATGGTTCTAATGACGACCGTGGAC ATGCGGCGAATTCCGCGAAA
Product: beta-lactamase
Products: NA
Alternate protein names: Secreted Peptidase; Serine-Type D-Ala-D-Ala Carboxypeptidase
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF
Sequences:
>Translated_357_residues MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF >Mature_357_residues MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38476; Mature: 38476
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASIT CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH KAATARLACELAVLGQIDLASPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSP HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCC TQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHLLNDHVLRPAKIDGGLNWAGV CCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC ADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR CCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCE LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPG ECHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCC PLIGHAGHALGFSGGAWWNPQTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF CHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHEEEC >Mature Secondary Structure MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASIT CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH KAATARLACELAVLGQIDLASPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSP HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCC TQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHLLNDHVLRPAKIDGGLNWAGV CCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC ADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR CCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCE LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPG ECHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCC PLIGHAGHALGFSGGAWWNPQTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF CHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA