Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055540

Identifier: 89055540

GI number: 89055540

Start: 3079781

End: 3080854

Strand: Direct

Name: 89055540

Synonym: Jann_3049

Alternate gene names: NA

Gene position: 3079781-3080854 (Clockwise)

Preceding gene: 89055538

Following gene: 89055541

Centisome position: 71.32

GC content: 61.45

Gene sequence:

>1074_bases
ATGAAGCAATTTGAGGAACTTGTGCGACGGGCGACTGAGACCGGAGGCTACCTTGCTGCCGGAGTATCGCGATTGCACAC
CGGCGAACCGGCCCAGACAATGCTGAGGGGGCGCCTGCATCCGTCTGATCCCGCTGGTGATCTTGATCCGGAACTAAGGA
TGCGATGTGCCTCCATTACTAAGGCCGCGACGGCGCGCTTAGCTTGTGAACTGGCCGTTCTGGGCCAGATTGACCTCGCA
TCACCCATTGCCCGTCTGCTGCCAGACGTCGATGACGCGATCACCTTCGACATGTTGCTAAGCCACACGTCCGGCCTTCG
CGATACTGACGGATACCTGACCCCGGCGGGCGTCTCGCCAACGCAGTTGGCACATCCGCCCGCGACGACGCCCGGCACAT
TCTTTCACTACGCCAACCTCAACTATGTCCTGCTTGGCGCGGGGCTTGAGGCCGCGACGCAGGCCCGGTTCGATCATCTG
TTGAACGATCACGTCCTGCGGCCAGCCAAAATCGATGGCGGACTGAATTGGGCAGGCGTTGCAGATCGCCGTCCTTTACC
GCTATTCCAGCGCATTGACGGGGCGTTGTCGCTTGTCGTGGATGGGCCGGATGCGGATTGGAGCGCCGACCTGATCTGGG
CAGAGGGACGCGGTTTTGAGCTGGAGACTTACCAGCTTGTGCGCGACACCTGCCTGATGTCCCCTCACGCAGGTCTGCGT
TTGTCATTGCCGGAAATGGCCAGGCTTGCGCGCCATTTGGGTGCGGATAGCGAGGCCGCAATCCTGCAGCGCGACGTGCT
TTGGCGGTACAACGGCAGAAACGGAGACGGGTGCAACGGACTCTTTCCGGCTTTCGGACGCGGCGTCACGATATTTGAAA
GTCATGCGCAGATCCCCGGACCATTGATCGGCCACGCCGGGCACGCCCTGGGCTTTTCCGGGGGCGCATGGTGGAACCCG
CAAACGGGCGTGGCCCATGCCTATGCCCTGACGGGGGCCGCCGATGAAACCTTGGCCAACGGAGACGAACCTTTCTTCCC
GGAAACCGAATTGCACCTTCTTCGCCTGTTCTGA

Upstream 100 bases:

>100_bases
GGATTTAGGCCGCAACACCATCGTGGGTGCGAGAGCATTCGGTTATCGTAAATCCAAATGGTCCGGGACTCAAATGCTCT
GAACCAACGAAGGATGTTAG

Downstream 100 bases:

>100_bases
TGATATGCGGTCAGCGGCTTATCGCCGATACCGCTGCCTGACCCGAAGTCAAATTGATGGTTCTAATGACGACCGTGGAC
ATGCGGCGAATTCCGCGAAA

Product: beta-lactamase

Products: NA

Alternate protein names: Secreted Peptidase; Serine-Type D-Ala-D-Ala Carboxypeptidase

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA
SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL
LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR
LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP
QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF

Sequences:

>Translated_357_residues
MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA
SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL
LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR
LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP
QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF
>Mature_357_residues
MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASITKAATARLACELAVLGQIDLA
SPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSPTQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHL
LNDHVLRPAKIDGGLNWAGVADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR
LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPGPLIGHAGHALGFSGGAWWNP
QTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38476; Mature: 38476

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASIT
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KAATARLACELAVLGQIDLASPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSP
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCC
TQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHLLNDHVLRPAKIDGGLNWAGV
CCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
ADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR
CCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCE
LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPG
ECHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCC
PLIGHAGHALGFSGGAWWNPQTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF
CHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHEEEC
>Mature Secondary Structure
MKQFEELVRRATETGGYLAAGVSRLHTGEPAQTMLRGRLHPSDPAGDLDPELRMRCASIT
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KAATARLACELAVLGQIDLASPIARLLPDVDDAITFDMLLSHTSGLRDTDGYLTPAGVSP
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCC
TQLAHPPATTPGTFFHYANLNYVLLGAGLEAATQARFDHLLNDHVLRPAKIDGGLNWAGV
CCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
ADRRPLPLFQRIDGALSLVVDGPDADWSADLIWAEGRGFELETYQLVRDTCLMSPHAGLR
CCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCE
LSLPEMARLARHLGADSEAAILQRDVLWRYNGRNGDGCNGLFPAFGRGVTIFESHAQIPG
ECHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCC
PLIGHAGHALGFSGGAWWNPQTGVAHAYALTGAADETLANGDEPFFPETELHLLRLF
CHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA