Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055515

Identifier: 89055515

GI number: 89055515

Start: 3045161

End: 3046240

Strand: Direct

Name: 89055515

Synonym: Jann_3024

Alternate gene names: NA

Gene position: 3045161-3046240 (Clockwise)

Preceding gene: 89055501

Following gene: 89055516

Centisome position: 70.52

GC content: 60.09

Gene sequence:

>1080_bases
ATGAGTTCTAGTGATAATTGGCGAGAAAGAATTTCCGTGCCGGATGCGTCTCATACTGCGAATAACGACGGAAGTGTCGG
CGAAAATCCGCGCGAAACGGATCGGGCAATTGCGGAATACCGCCGACTGCGCGACGCCCGCTCGGCCGCCCGCGCCGAGG
AGCGGAAACAGGAAACGGCGGAGGCCCGTGATCGGGCCCTGAAGGTCGCCCCGGATTGGACCATTGTGCGCGATCTGGCC
CGGTTCCTGCTTGACGAAGTCGGGCGCGATATCGAGGTCGCTGTTTGGTTGATCGAAGCCGAGACGCGGCTGGACGGCTT
CGACGGGCTGGCCCGCGCGGCAGAGCAATTGGCCGACATGATTAACGCCCATGGCATGGCGCTTCACCCGCAACCCGAAG
ACGCTTTAGATCGGCCGTTTGACATGATTGCCGGTCTCAATGGGATCGGTCGAGAGGGCACTTTGATCCAACCGCTTCGG
CTTGTACCACTGGTGGCCGAGGGCGATTATGGTCAACAGGGGTTGTGGAATGTCACCGACGGCGGCGGCGCAGCGAGCGT
TGCAGCAGCCTTGGCCACCAGTGGTACAGAGCAGATTTCCCACCACTTAAACGGTGTGGACCGCGCGCGCCGCGCAGTCG
CCCGTTGCGATACCGCCCTGACCGCGCTTCTGGGGCCGGACGCACCGCCGTTCAACAAAATTGACGAAAGCCTGGAAGAC
GCAGCCGCCGCGATCCGCAACCTTGCGGGCCATCTTTTGACGTCGGAACCCGACGAGAATACCGCCGATGCGACAGGTCT
CGGCGAGGATCCGCCCACCACCTCTGCCACGACGCAAGTAATGGGTAAAATTTCATCGCGGGACGAGGCCTTCGCACAAA
TGTTACGCATTGCTGCTTATTTCCGCAAAACCGAACCCCATTCTCCAATCGCCGATACGCTTGAAACATTGGTTCGGCGT
GGACGTATGGATTTTGTGACTTTGCTGACGGAATTGATACCGGACGATCACGCCCGCCAGGCGGTAATGACCACCGCAGG
AATAGGTTCAAAACCTCCCACCTCCGAGACAGAGGGCTGA

Upstream 100 bases:

>100_bases
GCGCGACGTTCAACCATTCTATTCGGTCGGCAACGGCGATCGCTTGAGCTATGGTGACAAAGAGAATCAATGAAATCGCA
TGACTAACTAACTGTATTTC

Downstream 100 bases:

>100_bases
CGCAAGCATAATTAGATCTAAATAAGTAGAAACACGATTTTCTTAAGGCCATTACGGAGAATTACCCGGCGAATCAACGC
GGAATTGGCCCTGAAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA-Like

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLA
RFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLR
LVPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED
AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRR
GRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG

Sequences:

>Translated_359_residues
MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLA
RFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLR
LVPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED
AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRR
GRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG
>Mature_358_residues
SSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETAEARDRALKVAPDWTIVRDLAR
FLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADMINAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRL
VPLVAEGDYGQQGLWNVTDGGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLEDA
AAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAYFRKTEPHSPIADTLETLVRRG
RMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38741; Mature: 38610

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETA
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARDRALKVAPDWTIVRDLARFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADM
HHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHH
INAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRLVPLVAEGDYGQQGLWNVTD
HHHCCCEECCCCCHHHHCCHHHHHCCCCCCCCCCEECCHHHEEEEECCCCCCCCCCCCCC
GGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAY
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
FRKTEPHSPIADTLETLVRRGRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSSDNWRERISVPDASHTANNDGSVGENPRETDRAIAEYRRLRDARSAARAEERKQETA
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARDRALKVAPDWTIVRDLARFLLDEVGRDIEVAVWLIEAETRLDGFDGLARAAEQLADM
HHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHH
INAHGMALHPQPEDALDRPFDMIAGLNGIGREGTLIQPLRLVPLVAEGDYGQQGLWNVTD
HHHCCCEECCCCCHHHHCCHHHHHCCCCCCCCCCEECCHHHEEEEECCCCCCCCCCCCCC
GGGAASVAAALATSGTEQISHHLNGVDRARRAVARCDTALTALLGPDAPPFNKIDESLED
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAAAIRNLAGHLLTSEPDENTADATGLGEDPPTTSATTQVMGKISSRDEAFAQMLRIAAY
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
FRKTEPHSPIADTLETLVRRGRMDFVTLLTELIPDDHARQAVMTTAGIGSKPPTSETEG
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA