Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055495

Identifier: 89055495

GI number: 89055495

Start: 3025298

End: 3025651

Strand: Direct

Name: 89055495

Synonym: Jann_3004

Alternate gene names: NA

Gene position: 3025298-3025651 (Clockwise)

Preceding gene: 89055494

Following gene: 89055497

Centisome position: 70.06

GC content: 53.39

Gene sequence:

>354_bases
TTGGGCTTTCTCGAAGCCTTTCTCGCAACCAGCCTTTCTCATCAGGCAGTCGGCGCAATGGAACGAGCAAGGATGCGTTT
CCAATTGGCATCCGAGGGCGAGACTTGCCCAAGTGAACAGGGATTGGAACTTCGCCCCGGGTCGGGGAGTGAGTTAGCCA
CGGTAGTGATATGGCCGGAGCGATTTCTTTTAGGCAGCCTTAGAGCAGACAAGTTGCGTGATTTCTTCGTATATTCGCTG
GTGGACATACTGCCCAAAATTCTGTTTCCCAAAGACACCGAAGCGTTCTTGGATGTCGTTGCCGGATCAGAGGAGGGTTT
GCCTCGTTCGCTCATGTTCGCCGACGTGACTTAG

Upstream 100 bases:

>100_bases
TGGAGGCAAGAACGTGAGCCTGATATCTCGGTTGCTGGGAACACGATGAGAAACTGTTTGCCAGAATAATCCTTGGTGCG
CGACAATAGGGGAAAGCTAT

Downstream 100 bases:

>100_bases
CACTTATTGACGAGACTTCATGCTCTATGGTTTCAATGTGATTGGTGAGCGCCTAATTTTGCGACTTAGCAGTTACTCCT
GAGACTTTTCTTAGATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MGFLEAFLATSLSHQAVGAMERARMRFQLASEGETCPSEQGLELRPGSGSELATVVIWPERFLLGSLRADKLRDFFVYSL
VDILPKILFPKDTEAFLDVVAGSEEGLPRSLMFADVT

Sequences:

>Translated_117_residues
MGFLEAFLATSLSHQAVGAMERARMRFQLASEGETCPSEQGLELRPGSGSELATVVIWPERFLLGSLRADKLRDFFVYSL
VDILPKILFPKDTEAFLDVVAGSEEGLPRSLMFADVT
>Mature_116_residues
GFLEAFLATSLSHQAVGAMERARMRFQLASEGETCPSEQGLELRPGSGSELATVVIWPERFLLGSLRADKLRDFFVYSLV
DILPKILFPKDTEAFLDVVAGSEEGLPRSLMFADVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12897; Mature: 12766

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLEAFLATSLSHQAVGAMERARMRFQLASEGETCPSEQGLELRPGSGSELATVVIWPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEECCH
RFLLGSLRADKLRDFFVYSLVDILPKILFPKDTEAFLDVVAGSEEGLPRSLMFADVT
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
GFLEAFLATSLSHQAVGAMERARMRFQLASEGETCPSEQGLELRPGSGSELATVVIWPE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEECCH
RFLLGSLRADKLRDFFVYSLVDILPKILFPKDTEAFLDVVAGSEEGLPRSLMFADVT
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA