Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055453

Identifier: 89055453

GI number: 89055453

Start: 2982781

End: 2983116

Strand: Direct

Name: 89055453

Synonym: Jann_2962

Alternate gene names: NA

Gene position: 2982781-2983116 (Clockwise)

Preceding gene: 89055450

Following gene: 89055454

Centisome position: 69.08

GC content: 65.18

Gene sequence:

>336_bases
ATGCGGATTTACAAGATATTGCGCGCGGAGGAATGGGCCGCGCTGGAGGGCGCCGGGGAAACGCCGGGCGCACCCATCGA
CGTGGCCGATGGCTACGTGCACTTTTCCACGGCAGCCCAGGCGGCCGAGACGGCGGCGAAGTATTTCGCCGGTGTGGACG
GATTGGTATTGGCCGCGATGGACGCCAACGCCTTGGGTGACGCGCTGAAATGGGAGGTCTCGCGCGGTGGCGACAAATTC
CCTCACCTATATGGCCCTCTGCGTCGTGCGGACGTGATCTGGCACGCGCCCCTTCCGGTCAAGGACGGTGCCCACGTCTT
CCCCGAGGGCATGTGA

Upstream 100 bases:

>100_bases
GAACTGACGCCAGCTTGGCGTCGGCTGGCTGCCAAGTAAAGCCGCTAGATGACGTCGGCGCGACACTTGACGCGACGCAA
CCGCCGGGGGAAACGGGCCC

Downstream 100 bases:

>100_bases
GATGCTGGAAAAACTGGCCCTGCCCCTTCTACGTCGCCTTGATCCGGAGCGCGCCCATGGGCTTGCGCTGAAGGGGGTGA
AGGCAGGGTTCGGGCCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRIYKILRAEEWAALEGAGETPGAPIDVADGYVHFSTAAQAAETAAKYFAGVDGLVLAAMDANALGDALKWEVSRGGDKF
PHLYGPLRRADVIWHAPLPVKDGAHVFPEGM

Sequences:

>Translated_111_residues
MRIYKILRAEEWAALEGAGETPGAPIDVADGYVHFSTAAQAAETAAKYFAGVDGLVLAAMDANALGDALKWEVSRGGDKF
PHLYGPLRRADVIWHAPLPVKDGAHVFPEGM
>Mature_111_residues
MRIYKILRAEEWAALEGAGETPGAPIDVADGYVHFSTAAQAAETAAKYFAGVDGLVLAAMDANALGDALKWEVSRGGDKF
PHLYGPLRRADVIWHAPLPVKDGAHVFPEGM

Specific function: Unknown

COG id: COG3502

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11848; Mature: 11848

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYKILRAEEWAALEGAGETPGAPIDVADGYVHFSTAAQAAETAAKYFAGVDGLVLAAM
CCHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEC
DANALGDALKWEVSRGGDKFPHLYGPLRRADVIWHAPLPVKDGAHVFPEGM
CCCHHCCHHEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIYKILRAEEWAALEGAGETPGAPIDVADGYVHFSTAAQAAETAAKYFAGVDGLVLAAM
CCHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEC
DANALGDALKWEVSRGGDKFPHLYGPLRRADVIWHAPLPVKDGAHVFPEGM
CCCHHCCHHEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA