Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055326

Identifier: 89055326

GI number: 89055326

Start: 2852612

End: 2854333

Strand: Reverse

Name: 89055326

Synonym: Jann_2835

Alternate gene names: NA

Gene position: 2854333-2852612 (Counterclockwise)

Preceding gene: 89055328

Following gene: 89055325

Centisome position: 66.1

GC content: 62.08

Gene sequence:

>1722_bases
TTGCTGCCTCAGTTTCCAGTTTTCTCTTGTTTCTCTTTATCAACAGCTGCCGTTCTCGCGTTTGCGCTGTCTCCGCAAGC
ATCCGCCCAAGGCATTGAATTACCTTCGCAATCCGTCATTGAGGCGCAACTTGCGGAATTGGGCGCAACTGTCCCCGGCT
CGATTTTCGCCATGCAGCCCTTCCGAAACGCACAGACCCTGACGGGCGAGGATGGCACGACCTACACGCTGACCTCGCTC
AACCCACACGTTAACTCCTGGTTTGTGCTGGAAACGACGCCCGTCGGTGGACGCCCTAGATTTGTGCACTTTGAAAACGG
CGCGCCTGACACCTGGGACATTTCCCTGATTGATGAGGACGGCCCGGCCCTGCTGATCGAAGGCGAGGGTGACAGCTTTG
CCTGCGCCCCGTGGGAGGATGGCGAATTGGCGGAGGCGCAATCCAGCTCTCTGCCCTACGCGCCGGTCTGTGATTGGAGC
CTGTTCGTGCGCAACCCGGTGTCGGGCAATCGCACGACCCGCGAGGCGGTGGCGGAATTCCTGCGCGAAAACGTGATCTT
CGGCGAATCCATCGTGAACCTGATCAAGGGGGCCTTCTTCGAGGATGCCTTCATGGTCTCGTCGGAAGGGGAGGAAGAGC
TGGAGGAAATCGATGGCGTCGAACTCCTCGGGACGGCGCTTTTAGACAGCACGCCCAATATGCGGCCCTATATGGGGTTC
GACCTGACGGGCACAGATGCCGGCGCGATGACCGCTGGCGCCTGGTATGAGGTGGAGGAAAGCCCCGGCATCTATGCCTC
CGTCATGCAGCCGGGCATGATCGCGGGCGAGGTGATGCAGACCGGTGGGGCCAACGGTCTGGACGGGATCGAGCGTCGGG
CCGACGTTTATCTGGTGGCCTTTGACATGGCGCGGTTTGACATCGGCTATGAGGTTGGCACCGATCACCCGGCCTTGGGC
TGGTCGTCGCGCCCCCAGAACCGGCACAACCAAGGACGCGGGCCGGACGGCTTCAACACGCCCGCGCCGCTGGTGCGCAC
CGGCATGCTGAACCCCGCCCTGGTCGACCGCGTCGCCGCGACGTTCACGGCAGGCTTCAAACGCGACCACGGCGCCTGGC
GGTTTGGCGATTACGCCACGTTCAACTACGGCCACCATTACGGCTTCATGCAGAATGGCGTGATCCTGTCGCGCCTGTGG
CCGAACCTCGCAACCCTGTCGCTGACCCATGATGGGGAGGTGACGATGCGCACCTGGTCCGAGGAGGATGACGCCATCCT
GCCCGATCTGGTCTTCGCGCGCCAAAATGGCGTGCCGATTATCGAAGACGGCGTACCGGGGCCGCGTGTGACGTCCTGGG
GCGGCGGCAATTGGTCGGGCGATGCGAATGCCGTCCTGCGCACGCTGCGGGGCGGGGCCTGCATGCGCACCGTTGAGGGG
CGTCAGTTCTTGATCTACGCCTATTTCTCCACGGCCACGCCGTCGGCAATGGCGCGGACGTTCCAAGCTTACCAATGCGA
CTATGCCATGCTGCTCGATATGAACAGCCAGGAGCATACGTATATGGCCCTCTATGTCCATGATGAGGACGGCGAAGAGG
ATATGGACGTGCAGCACCTCGTGTCGGGCATGGCCGATGTGGACCCCGATAACGGGCGCGTGGCGCGGTTTATCTCTGCG
CCCGACAACCGTGATTTCTTTTACCTGCTGCGGAGGCAATAA

Upstream 100 bases:

>100_bases
GCGTCATCGGCTGGTTTGTTGCAAACCTAATCCGGATCTTTCTAATACCCCCGCACGCTGCCCGTTGCGCGGACCCATTT
TCATAAGGATGGAGCTTGTC

Downstream 100 bases:

>100_bases
GTGATGCGATTGAATTCTCTGGTCGGGGCGGCCTTGGCTGCGGGCCTTCTGGTGGTGAGCGGAGGGGCGGCCACGGCGCA
ATCCCTGGCCGAGCGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MLPQFPVFSCFSLSTAAVLAFALSPQASAQGIELPSQSVIEAQLAELGATVPGSIFAMQPFRNAQTLTGEDGTTYTLTSL
NPHVNSWFVLETTPVGGRPRFVHFENGAPDTWDISLIDEDGPALLIEGEGDSFACAPWEDGELAEAQSSSLPYAPVCDWS
LFVRNPVSGNRTTREAVAEFLRENVIFGESIVNLIKGAFFEDAFMVSSEGEEELEEIDGVELLGTALLDSTPNMRPYMGF
DLTGTDAGAMTAGAWYEVEESPGIYASVMQPGMIAGEVMQTGGANGLDGIERRADVYLVAFDMARFDIGYEVGTDHPALG
WSSRPQNRHNQGRGPDGFNTPAPLVRTGMLNPALVDRVAATFTAGFKRDHGAWRFGDYATFNYGHHYGFMQNGVILSRLW
PNLATLSLTHDGEVTMRTWSEEDDAILPDLVFARQNGVPIIEDGVPGPRVTSWGGGNWSGDANAVLRTLRGGACMRTVEG
RQFLIYAYFSTATPSAMARTFQAYQCDYAMLLDMNSQEHTYMALYVHDEDGEEDMDVQHLVSGMADVDPDNGRVARFISA
PDNRDFFYLLRRQ

Sequences:

>Translated_573_residues
MLPQFPVFSCFSLSTAAVLAFALSPQASAQGIELPSQSVIEAQLAELGATVPGSIFAMQPFRNAQTLTGEDGTTYTLTSL
NPHVNSWFVLETTPVGGRPRFVHFENGAPDTWDISLIDEDGPALLIEGEGDSFACAPWEDGELAEAQSSSLPYAPVCDWS
LFVRNPVSGNRTTREAVAEFLRENVIFGESIVNLIKGAFFEDAFMVSSEGEEELEEIDGVELLGTALLDSTPNMRPYMGF
DLTGTDAGAMTAGAWYEVEESPGIYASVMQPGMIAGEVMQTGGANGLDGIERRADVYLVAFDMARFDIGYEVGTDHPALG
WSSRPQNRHNQGRGPDGFNTPAPLVRTGMLNPALVDRVAATFTAGFKRDHGAWRFGDYATFNYGHHYGFMQNGVILSRLW
PNLATLSLTHDGEVTMRTWSEEDDAILPDLVFARQNGVPIIEDGVPGPRVTSWGGGNWSGDANAVLRTLRGGACMRTVEG
RQFLIYAYFSTATPSAMARTFQAYQCDYAMLLDMNSQEHTYMALYVHDEDGEEDMDVQHLVSGMADVDPDNGRVARFISA
PDNRDFFYLLRRQ
>Mature_573_residues
MLPQFPVFSCFSLSTAAVLAFALSPQASAQGIELPSQSVIEAQLAELGATVPGSIFAMQPFRNAQTLTGEDGTTYTLTSL
NPHVNSWFVLETTPVGGRPRFVHFENGAPDTWDISLIDEDGPALLIEGEGDSFACAPWEDGELAEAQSSSLPYAPVCDWS
LFVRNPVSGNRTTREAVAEFLRENVIFGESIVNLIKGAFFEDAFMVSSEGEEELEEIDGVELLGTALLDSTPNMRPYMGF
DLTGTDAGAMTAGAWYEVEESPGIYASVMQPGMIAGEVMQTGGANGLDGIERRADVYLVAFDMARFDIGYEVGTDHPALG
WSSRPQNRHNQGRGPDGFNTPAPLVRTGMLNPALVDRVAATFTAGFKRDHGAWRFGDYATFNYGHHYGFMQNGVILSRLW
PNLATLSLTHDGEVTMRTWSEEDDAILPDLVFARQNGVPIIEDGVPGPRVTSWGGGNWSGDANAVLRTLRGGACMRTVEG
RQFLIYAYFSTATPSAMARTFQAYQCDYAMLLDMNSQEHTYMALYVHDEDGEEDMDVQHLVSGMADVDPDNGRVARFISA
PDNRDFFYLLRRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62651; Mature: 62651

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQFPVFSCFSLSTAAVLAFALSPQASAQGIELPSQSVIEAQLAELGATVPGSIFAMQP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECC
FRNAQTLTGEDGTTYTLTSLNPHVNSWFVLETTPVGGRPRFVHFENGAPDTWDISLIDED
CCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECC
GPALLIEGEGDSFACAPWEDGELAEAQSSSLPYAPVCDWSLFVRNPVSGNRTTREAVAEF
CCEEEEECCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LRENVIFGESIVNLIKGAFFEDAFMVSSEGEEELEEIDGVELLGTALLDSTPNMRPYMGF
HHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCE
DLTGTDAGAMTAGAWYEVEESPGIYASVMQPGMIAGEVMQTGGANGLDGIERRADVYLVA
EECCCCCCCEECCCEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCEEEEE
FDMARFDIGYEVGTDHPALGWSSRPQNRHNQGRGPDGFNTPAPLVRTGMLNPALVDRVAA
EEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
TFTAGFKRDHGAWRFGDYATFNYGHHYGFMQNGVILSRLWPNLATLSLTHDGEVTMRTWS
HHHHCCCCCCCCEECCCEEEECCCCCCCHHCCCEEHHHHCCCEEEEEEECCCCEEEEECC
EEDDAILPDLVFARQNGVPIIEDGVPGPRVTSWGGGNWSGDANAVLRTLRGGACMRTVEG
CCCCCCCCHHHHHCCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEECC
RQFLIYAYFSTATPSAMARTFQAYQCDYAMLLDMNSQEHTYMALYVHDEDGEEDMDVQHL
CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHH
VSGMADVDPDNGRVARFISAPDNRDFFYLLRRQ
HHHHHCCCCCCCCEEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MLPQFPVFSCFSLSTAAVLAFALSPQASAQGIELPSQSVIEAQLAELGATVPGSIFAMQP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECC
FRNAQTLTGEDGTTYTLTSLNPHVNSWFVLETTPVGGRPRFVHFENGAPDTWDISLIDED
CCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECC
GPALLIEGEGDSFACAPWEDGELAEAQSSSLPYAPVCDWSLFVRNPVSGNRTTREAVAEF
CCEEEEECCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LRENVIFGESIVNLIKGAFFEDAFMVSSEGEEELEEIDGVELLGTALLDSTPNMRPYMGF
HHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCE
DLTGTDAGAMTAGAWYEVEESPGIYASVMQPGMIAGEVMQTGGANGLDGIERRADVYLVA
EECCCCCCCEECCCEEEECCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCEEEEE
FDMARFDIGYEVGTDHPALGWSSRPQNRHNQGRGPDGFNTPAPLVRTGMLNPALVDRVAA
EEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
TFTAGFKRDHGAWRFGDYATFNYGHHYGFMQNGVILSRLWPNLATLSLTHDGEVTMRTWS
HHHHCCCCCCCCEECCCEEEECCCCCCCHHCCCEEHHHHCCCEEEEEEECCCCEEEEECC
EEDDAILPDLVFARQNGVPIIEDGVPGPRVTSWGGGNWSGDANAVLRTLRGGACMRTVEG
CCCCCCCCHHHHHCCCCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHCCCCEEEEECC
RQFLIYAYFSTATPSAMARTFQAYQCDYAMLLDMNSQEHTYMALYVHDEDGEEDMDVQHL
CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHH
VSGMADVDPDNGRVARFISAPDNRDFFYLLRRQ
HHHHHCCCCCCCCEEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA