Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055325

Identifier: 89055325

GI number: 89055325

Start: 2851580

End: 2852608

Strand: Reverse

Name: 89055325

Synonym: Jann_2834

Alternate gene names: NA

Gene position: 2852608-2851580 (Counterclockwise)

Preceding gene: 89055326

Following gene: 89055319

Centisome position: 66.06

GC content: 64.72

Gene sequence:

>1029_bases
ATGCGATTGAATTCTCTGGTCGGGGCGGCCTTGGCTGCGGGCCTTCTGGTGGTGAGCGGAGGGGCGGCCACGGCGCAATC
CCTGGCCGAGCGCAATGAGCTGCTGTTTCAACAATTGCAACAGATCCGGGGCCTGTCGAACTCGGAAATCAACCGCGTGC
GGACGATCTTCGCCAACTCCCCTAATGGCTGGATGGGGCAGGGCAATCCGGCCGTCACGCAGCACCCGTTGACGCCGGAG
CAGGCGGCCGCGCAGGTCGGCGGCACGGTGGCTCAGGTGCAGGCCAGCTATCGCAACCGCGACTATGAGAGGATCTGTGG
CGGGCCCTATATGGTGCCGCTCTATGATCCGGCGACGCAGACCCCGCGCGATGCCACGGTATGTGCGGATATGTTTGAAT
ATCCCAACATCCCAATGGTTTACCCGGTCGTCTGGGTCCGCGCGAATGAGGCTGCACAATTGTGTGCCGCAGAGGGCGGG
CGCATCGGCGACGCCCATGAATGGGAAGGCGCATCGGCGGGGCAGCTGTTGCCGCCCGACTACCCCTTCGATCTGGTCCG
GGGGATGGGCCTGTCGGCGGCGGTCAACACGATCCGCAACTATCACAACAACGCCTATGCCAGCACGCGCGGGACCTACT
CCATCGGCGCGTGGCAATCGGGTGTCTGTGCGACGGGGTCGTTCAAGAACGCGTCGTGCAACGGCGGCAGCTTCCAGGGC
TGCGGCTCCAACACCTATCCCGCGGGCAGCTTCCCGGCCTGCCGGTCGCCCCTGGGGGTCTACGACATCGACGGCAACGC
GGCAGAGCATATGAACCTGCCCCTGTCGGAGGATCAGATGGCCTCCCGAGGCTCCACGACCCTCGGCGTGACCGAGATGA
AAGGGTCCTGGTTCATTTGGGACACGATCCGTGCCCACGAGCATTGGTCCCGCTGGCGCGCCCCGTTCTGGCACGGCACC
CGCGTGATGTCGGAAGGCAGCCACCGGAACTATCATCTGGGCTTCCGGTGTTTCCGAGACGTCCGATAA

Upstream 100 bases:

>100_bases
GGGCATGGCCGATGTGGACCCCGATAACGGGCGCGTGGCGCGGTTTATCTCTGCGCCCGACAACCGTGATTTCTTTTACC
TGCTGCGGAGGCAATAAGTG

Downstream 100 bases:

>100_bases
TCTGGTCCTGACAAAACAAAAGGCGCGCCACACCGGGCGCGCCTTTTTCATTTCCAAATCCGTGGCTTAGAGGGAGGCGA
GCCGCACCGTCGCACCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE
QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG
RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG
CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT
RVMSEGSHRNYHLGFRCFRDVR

Sequences:

>Translated_342_residues
MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE
QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG
RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG
CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT
RVMSEGSHRNYHLGFRCFRDVR
>Mature_342_residues
MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE
QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG
RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG
CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT
RVMSEGSHRNYHLGFRCFRDVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37144; Mature: 37144

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANS
CCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECC
PNGWMGQGNPAVTQHPLTPEQAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQ
CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCC
TPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGGRIGDAHEWEGASAGQLLPPD
CCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
YPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG
CCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCC
CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIW
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCEEEE
DTIRAHEHWSRWRAPFWHGTRVMSEGSHRNYHLGFRCFRDVR
EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHHHCCCC
>Mature Secondary Structure
MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANS
CCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECC
PNGWMGQGNPAVTQHPLTPEQAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQ
CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCC
TPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGGRIGDAHEWEGASAGQLLPPD
CCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
YPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG
CCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCC
CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIW
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCEEEE
DTIRAHEHWSRWRAPFWHGTRVMSEGSHRNYHLGFRCFRDVR
EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA