| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055325
Identifier: 89055325
GI number: 89055325
Start: 2851580
End: 2852608
Strand: Reverse
Name: 89055325
Synonym: Jann_2834
Alternate gene names: NA
Gene position: 2852608-2851580 (Counterclockwise)
Preceding gene: 89055326
Following gene: 89055319
Centisome position: 66.06
GC content: 64.72
Gene sequence:
>1029_bases ATGCGATTGAATTCTCTGGTCGGGGCGGCCTTGGCTGCGGGCCTTCTGGTGGTGAGCGGAGGGGCGGCCACGGCGCAATC CCTGGCCGAGCGCAATGAGCTGCTGTTTCAACAATTGCAACAGATCCGGGGCCTGTCGAACTCGGAAATCAACCGCGTGC GGACGATCTTCGCCAACTCCCCTAATGGCTGGATGGGGCAGGGCAATCCGGCCGTCACGCAGCACCCGTTGACGCCGGAG CAGGCGGCCGCGCAGGTCGGCGGCACGGTGGCTCAGGTGCAGGCCAGCTATCGCAACCGCGACTATGAGAGGATCTGTGG CGGGCCCTATATGGTGCCGCTCTATGATCCGGCGACGCAGACCCCGCGCGATGCCACGGTATGTGCGGATATGTTTGAAT ATCCCAACATCCCAATGGTTTACCCGGTCGTCTGGGTCCGCGCGAATGAGGCTGCACAATTGTGTGCCGCAGAGGGCGGG CGCATCGGCGACGCCCATGAATGGGAAGGCGCATCGGCGGGGCAGCTGTTGCCGCCCGACTACCCCTTCGATCTGGTCCG GGGGATGGGCCTGTCGGCGGCGGTCAACACGATCCGCAACTATCACAACAACGCCTATGCCAGCACGCGCGGGACCTACT CCATCGGCGCGTGGCAATCGGGTGTCTGTGCGACGGGGTCGTTCAAGAACGCGTCGTGCAACGGCGGCAGCTTCCAGGGC TGCGGCTCCAACACCTATCCCGCGGGCAGCTTCCCGGCCTGCCGGTCGCCCCTGGGGGTCTACGACATCGACGGCAACGC GGCAGAGCATATGAACCTGCCCCTGTCGGAGGATCAGATGGCCTCCCGAGGCTCCACGACCCTCGGCGTGACCGAGATGA AAGGGTCCTGGTTCATTTGGGACACGATCCGTGCCCACGAGCATTGGTCCCGCTGGCGCGCCCCGTTCTGGCACGGCACC CGCGTGATGTCGGAAGGCAGCCACCGGAACTATCATCTGGGCTTCCGGTGTTTCCGAGACGTCCGATAA
Upstream 100 bases:
>100_bases GGGCATGGCCGATGTGGACCCCGATAACGGGCGCGTGGCGCGGTTTATCTCTGCGCCCGACAACCGTGATTTCTTTTACC TGCTGCGGAGGCAATAAGTG
Downstream 100 bases:
>100_bases TCTGGTCCTGACAAAACAAAAGGCGCGCCACACCGGGCGCGCCTTTTTCATTTCCAAATCCGTGGCTTAGAGGGAGGCGA GCCGCACCGTCGCACCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT RVMSEGSHRNYHLGFRCFRDVR
Sequences:
>Translated_342_residues MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT RVMSEGSHRNYHLGFRCFRDVR >Mature_342_residues MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANSPNGWMGQGNPAVTQHPLTPE QAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQTPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGG RIGDAHEWEGASAGQLLPPDYPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIWDTIRAHEHWSRWRAPFWHGT RVMSEGSHRNYHLGFRCFRDVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37144; Mature: 37144
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANS CCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECC PNGWMGQGNPAVTQHPLTPEQAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQ CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCC TPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGGRIGDAHEWEGASAGQLLPPD CCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC YPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG CCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCC CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIW CCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCEEEE DTIRAHEHWSRWRAPFWHGTRVMSEGSHRNYHLGFRCFRDVR EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHHHCCCC >Mature Secondary Structure MRLNSLVGAALAAGLLVVSGGAATAQSLAERNELLFQQLQQIRGLSNSEINRVRTIFANS CCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECC PNGWMGQGNPAVTQHPLTPEQAAAQVGGTVAQVQASYRNRDYERICGGPYMVPLYDPATQ CCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCC TPRDATVCADMFEYPNIPMVYPVVWVRANEAAQLCAAEGGRIGDAHEWEGASAGQLLPPD CCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC YPFDLVRGMGLSAAVNTIRNYHNNAYASTRGTYSIGAWQSGVCATGSFKNASCNGGSFQG CCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCEECCCCCCCCCCCCCCCC CGSNTYPAGSFPACRSPLGVYDIDGNAAEHMNLPLSEDQMASRGSTTLGVTEMKGSWFIW CCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCEEEE DTIRAHEHWSRWRAPFWHGTRVMSEGSHRNYHLGFRCFRDVR EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA