| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055303
Identifier: 89055303
GI number: 89055303
Start: 2827014
End: 2827952
Strand: Reverse
Name: 89055303
Synonym: Jann_2812
Alternate gene names: NA
Gene position: 2827952-2827014 (Counterclockwise)
Preceding gene: 89055305
Following gene: 89055302
Centisome position: 65.49
GC content: 60.81
Gene sequence:
>939_bases TTGAGGCTGCCTGTTGTTGGGAGCCCCCTCTTTATCGTGTCCAACCCGGACCTGGTCATCGCCCAGTGCTGCGCGGGGAT TGTCGGATCTTTTCCGGCCCTGAACGCGCGCGAGAAGGACGGTGATCCGGTCGCGTTGGAGGCGTGGTTGAAGCAAATCA CCGAGGCGTTGGACGCGTGGAACCAGGCCAACCCCGATACACCGGCGGCGCCTTACGCGGTGAACCAAATCGTTCATCGG TCAAATGCCCGCCTGGAACGGGATCTGGAGATCTGTGCCCGCTGGAACGTGCCGATCTGGATCACGTCGCTTGGCGCGCG GACGGAAGTGAACGACGCTGCCCATTCCTGTGGCGGCATAGCGTTGCACGATATCATTAATAACACGTTTGCGAAAAAGG CGATTTCCAAGGGCGCGGACGGGCTGATCGCGGTTGCAGCCGGTGCCGGCGGGCACGCTGGCCCGCAATCGCCCTTCGCG CTGGTGCAGGAAATCCGCGAATGGTTCGACGGGCCGTTGCTGCTGAGTGGGTCGATTGCAACGGGTGGCGCGGTGCTCGC CACGCAGGCAATGGGGGCTGATCTGGCCTATATTGGCTCTCCGTTTATTGCCACAGATGAAGCCAACGCGGCACCGGCTT ACAAACAGATGATAGCTGATTCCGGGGCGGAAGATATTGTGACATCTTCTTTGTTTACAGGTGTTTCGGGGAATTACTTA AAGCCATCAATCAGCGCAGCAGGACTGGACCCGGACGCGTTGGAAACGGCGGATGCGAAGTCCATGAGCTTTGCGCAGGA AGCATCGAAGCCCAAAGCCTGGAGCCAGGTCTGGGGTGCGGGCCAAGGGATCGGAGCGGTGAAATCAGTGGGCCCTGCGG CGGCGCTGGTGGATCGGATTGCCGCAGAATACGCGGCGGCCCGGGAGGGGTTGTTGTAA
Upstream 100 bases:
>100_bases GGTGCGTTCGTCTTGCCGAGGCCGGGCGGCCGCGTTAGCGTCGGGGCCAAGGGAGAGATCAATGCCAGAAAATCGAGAAT TACCAAGCGTTTTTAAAGGC
Downstream 100 bases:
>100_bases TGGATCTGGGCGTCTCCGACAGGGTGAAGCCGCTGGTGGAGGCGGTCCGGCGCATGGTGCGCGACGACATTGCGCCACTT GATATGGAATACCACGCGGA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRLPVVGSPLFIVSNPDLVIAQCCAGIVGSFPALNAREKDGDPVALEAWLKQITEALDAWNQANPDTPAAPYAVNQIVHR SNARLERDLEICARWNVPIWITSLGARTEVNDAAHSCGGIALHDIINNTFAKKAISKGADGLIAVAAGAGGHAGPQSPFA LVQEIREWFDGPLLLSGSIATGGAVLATQAMGADLAYIGSPFIATDEANAAPAYKQMIADSGAEDIVTSSLFTGVSGNYL KPSISAAGLDPDALETADAKSMSFAQEASKPKAWSQVWGAGQGIGAVKSVGPAAALVDRIAAEYAAAREGLL
Sequences:
>Translated_312_residues MRLPVVGSPLFIVSNPDLVIAQCCAGIVGSFPALNAREKDGDPVALEAWLKQITEALDAWNQANPDTPAAPYAVNQIVHR SNARLERDLEICARWNVPIWITSLGARTEVNDAAHSCGGIALHDIINNTFAKKAISKGADGLIAVAAGAGGHAGPQSPFA LVQEIREWFDGPLLLSGSIATGGAVLATQAMGADLAYIGSPFIATDEANAAPAYKQMIADSGAEDIVTSSLFTGVSGNYL KPSISAAGLDPDALETADAKSMSFAQEASKPKAWSQVWGAGQGIGAVKSVGPAAALVDRIAAEYAAAREGLL >Mature_312_residues MRLPVVGSPLFIVSNPDLVIAQCCAGIVGSFPALNAREKDGDPVALEAWLKQITEALDAWNQANPDTPAAPYAVNQIVHR SNARLERDLEICARWNVPIWITSLGARTEVNDAAHSCGGIALHDIINNTFAKKAISKGADGLIAVAAGAGGHAGPQSPFA LVQEIREWFDGPLLLSGSIATGGAVLATQAMGADLAYIGSPFIATDEANAAPAYKQMIADSGAEDIVTSSLFTGVSGNYL KPSISAAGLDPDALETADAKSMSFAQEASKPKAWSQVWGAGQGIGAVKSVGPAAALVDRIAAEYAAAREGLL
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32186; Mature: 32186
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPVVGSPLFIVSNPDLVIAQCCAGIVGSFPALNAREKDGDPVALEAWLKQITEALDAW CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NQANPDTPAAPYAVNQIVHRSNARLERDLEICARWNVPIWITSLGARTEVNDAAHSCGGI CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCC ALHDIINNTFAKKAISKGADGLIAVAAGAGGHAGPQSPFALVQEIREWFDGPLLLSGSIA HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC TGGAVLATQAMGADLAYIGSPFIATDEANAAPAYKQMIADSGAEDIVTSSLFTGVSGNYL CCCHHHHHHHHCCCHHHHCCCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCC KPSISAAGLDPDALETADAKSMSFAQEASKPKAWSQVWGAGQGIGAVKSVGPAAALVDRI CCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHH AAEYAAAREGLL HHHHHHHHCCCC >Mature Secondary Structure MRLPVVGSPLFIVSNPDLVIAQCCAGIVGSFPALNAREKDGDPVALEAWLKQITEALDAW CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NQANPDTPAAPYAVNQIVHRSNARLERDLEICARWNVPIWITSLGARTEVNDAAHSCGGI CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCC ALHDIINNTFAKKAISKGADGLIAVAAGAGGHAGPQSPFALVQEIREWFDGPLLLSGSIA HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC TGGAVLATQAMGADLAYIGSPFIATDEANAAPAYKQMIADSGAEDIVTSSLFTGVSGNYL CCCHHHHHHHHCCCHHHHCCCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCC KPSISAAGLDPDALETADAKSMSFAQEASKPKAWSQVWGAGQGIGAVKSVGPAAALVDRI CCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHH AAEYAAAREGLL HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA