Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055297

Identifier: 89055297

GI number: 89055297

Start: 2820158

End: 2821153

Strand: Direct

Name: 89055297

Synonym: Jann_2806

Alternate gene names: NA

Gene position: 2820158-2821153 (Clockwise)

Preceding gene: 89055296

Following gene: 89055300

Centisome position: 65.31

GC content: 57.23

Gene sequence:

>996_bases
ATGGCGCGCAAAGCGACCTCCTTCAATGTCGTGATCGTGGGGCAGAACGGTCGCCTGCAATATGAAGCGGCCCTGTTTTT
AGCCTCTTTCCGGGCGGCGAACGCCAACTTCCCCGGCAAACTTTTCGTCGCAGAACCTCAGCCGGGCCCTCGTTGGTCAA
AGGATCCGCGGATGGGTGACCCTGCCGTGCGTGCGTTGATATCGGACCTTGGCGCAGAGATAATTCCGTTTATCAACAAG
CACTTCGGTGAGACCTACCCCTATGGCAACAAGATCGAAGCCCTCTTGGCTTTGCCGAAAGGCGAGCCCTTCGTTTTCTT
CGATACCGACACGCTGATCATGGGCGATCTGACAAAAGTGCCGTTCGACTTCGCAAAACCCAGTGCGTCGCGTCGGGTGC
AGGGGACATGGCCGAATATCGAGCTTTATGGGCCAGGATATACGGCGATCTGGAAATCGCTTTACGACATGTTCGATCTG
GATTTTGAAGGCTCTCTCGACTGCTCGCACCCGGACGAATACTGGCGCCGCTACCTCTACTTCAACGCAGGTTTCTTCTA
CCACGCCTGCCCGCACGAATTCGGACAGCGCTTCGCGGAACATGCCACGCGCATTCACGACGACGGCCCCCGTGAACTCG
TCTGTCAGTCATTGGATCCATGGCTTGATCAGGTTGCCTTGCCCCTTGTGATCCACTCTTTTGGCGGTGGCCGCGATGCG
TTGGAGCCTGGCTGGATCGACGGCAAAACATCATGTCATTACAGGGTCCTACCCCTCTTGTACGCACGCGAAGAACAACA
CGTCGTCGATACGCTGGAGAAGGTCACCGCCCCCAACAAGATCAAGAAGGTTCTCAAAGCCTACGAGCCGATGCGCCGCA
TGATCTTCCAGGGCAAAGGGGCCAAGGCGCGCGCGCTGTTTGATCAGGCGAACTTGCCCCGGCGCGAGCAACAGATCCGC
AATACCCTGAAACGTGAGAAGCTCTGGCTGCGATGA

Upstream 100 bases:

>100_bases
CTTCGACAGTAATTTTTGCGGTGTCCGAACGTCGGTCCCTCGTGACGCGCCGGTCTGTTTCCCGCTATAGTCGTCGAAAA
TTGAGCAGCGGGACGTAACC

Downstream 100 bases:

>100_bases
CCCAGGCGCTGACCCGTAGGATGTGGGCTCAGATCTACACCAAGCACCAAGGATGTCATCCCGGCCCGTTTCGGGCTGGG
GCAATTCTTAAGGAAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MARKATSFNVVIVGQNGRLQYEAALFLASFRAANANFPGKLFVAEPQPGPRWSKDPRMGDPAVRALISDLGAEIIPFINK
HFGETYPYGNKIEALLALPKGEPFVFFDTDTLIMGDLTKVPFDFAKPSASRRVQGTWPNIELYGPGYTAIWKSLYDMFDL
DFEGSLDCSHPDEYWRRYLYFNAGFFYHACPHEFGQRFAEHATRIHDDGPRELVCQSLDPWLDQVALPLVIHSFGGGRDA
LEPGWIDGKTSCHYRVLPLLYAREEQHVVDTLEKVTAPNKIKKVLKAYEPMRRMIFQGKGAKARALFDQANLPRREQQIR
NTLKREKLWLR

Sequences:

>Translated_331_residues
MARKATSFNVVIVGQNGRLQYEAALFLASFRAANANFPGKLFVAEPQPGPRWSKDPRMGDPAVRALISDLGAEIIPFINK
HFGETYPYGNKIEALLALPKGEPFVFFDTDTLIMGDLTKVPFDFAKPSASRRVQGTWPNIELYGPGYTAIWKSLYDMFDL
DFEGSLDCSHPDEYWRRYLYFNAGFFYHACPHEFGQRFAEHATRIHDDGPRELVCQSLDPWLDQVALPLVIHSFGGGRDA
LEPGWIDGKTSCHYRVLPLLYAREEQHVVDTLEKVTAPNKIKKVLKAYEPMRRMIFQGKGAKARALFDQANLPRREQQIR
NTLKREKLWLR
>Mature_330_residues
ARKATSFNVVIVGQNGRLQYEAALFLASFRAANANFPGKLFVAEPQPGPRWSKDPRMGDPAVRALISDLGAEIIPFINKH
FGETYPYGNKIEALLALPKGEPFVFFDTDTLIMGDLTKVPFDFAKPSASRRVQGTWPNIELYGPGYTAIWKSLYDMFDLD
FEGSLDCSHPDEYWRRYLYFNAGFFYHACPHEFGQRFAEHATRIHDDGPRELVCQSLDPWLDQVALPLVIHSFGGGRDAL
EPGWIDGKTSCHYRVLPLLYAREEQHVVDTLEKVTAPNKIKKVLKAYEPMRRMIFQGKGAKARALFDQANLPRREQQIRN
TLKREKLWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37842; Mature: 37711

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKATSFNVVIVGQNGRLQYEAALFLASFRAANANFPGKLFVAEPQPGPRWSKDPRMGD
CCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC
PAVRALISDLGAEIIPFINKHFGETYPYGNKIEALLALPKGEPFVFFDTDTLIMGDLTKV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCHHHC
PFDFAKPSASRRVQGTWPNIELYGPGYTAIWKSLYDMFDLDFEGSLDCSHPDEYWRRYLY
CCHHCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FNAGFFYHACPHEFGQRFAEHATRIHDDGPRELVCQSLDPWLDQVALPLVIHSFGGGRDA
CCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
LEPGWIDGKTSCHYRVLPLLYAREEQHVVDTLEKVTAPNKIKKVLKAYEPMRRMIFQGKG
CCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AKARALFDQANLPRREQQIRNTLKREKLWLR
CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARKATSFNVVIVGQNGRLQYEAALFLASFRAANANFPGKLFVAEPQPGPRWSKDPRMGD
CCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC
PAVRALISDLGAEIIPFINKHFGETYPYGNKIEALLALPKGEPFVFFDTDTLIMGDLTKV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCHHHC
PFDFAKPSASRRVQGTWPNIELYGPGYTAIWKSLYDMFDLDFEGSLDCSHPDEYWRRYLY
CCHHCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FNAGFFYHACPHEFGQRFAEHATRIHDDGPRELVCQSLDPWLDQVALPLVIHSFGGGRDA
CCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
LEPGWIDGKTSCHYRVLPLLYAREEQHVVDTLEKVTAPNKIKKVLKAYEPMRRMIFQGKG
CCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AKARALFDQANLPRREQQIRNTLKREKLWLR
CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA