| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055270
Identifier: 89055270
GI number: 89055270
Start: 2795825
End: 2796205
Strand: Direct
Name: 89055270
Synonym: Jann_2779
Alternate gene names: NA
Gene position: 2795825-2796205 (Clockwise)
Preceding gene: 89055269
Following gene: 89055272
Centisome position: 64.75
GC content: 59.32
Gene sequence:
>381_bases ATGACAGAAGCCCAGGCCATCGCAATTCTCTGCGCCATGTTGGGGGGAGAGCCCGAACAGCGCGTCAGCTATACGCTCGA TGCGGTCAGCACCCATGTGCGTATCGATTGTATAACGGAGACTCACGCCATCGAGATCGGGTTGGACCACACGCGCGGCT CCTACGACAGTCTGCACCAGGCAACGTTCAATGCCATGCTGACGGATCGCGAACCCATGGTTATCCTGATCGACACGGAC ACCTACGAATCCCAATACGAATATCAGATCGAGACGGTGGCCCGTGCCCATGGCGTGGATTACGCCGTCTGGGACGAGCA TTTCCTGATCCGCTGGCAAATGACGGCCCCGTTCCGCGCACGCCTGGCCGACCACAGGTAG
Upstream 100 bases:
>100_bases GCGCGCACGCTTGCCGATCTGCCCGGTCGGCTGGTTCGGGATTAACCAATTTCCTTAACGCGGGGTTAACATCGGCCCCG CATGTTCCTATATCGTTCTC
Downstream 100 bases:
>100_bases CTAACGCGACCCGACCCGAACATGCCCCCCGCCGTAGGCGGCAGCGGCTGACGGGAGATCCCGCAACTCCGCGAGGAACC GGCGCACCTGTAAGCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTEAQAIAILCAMLGGEPEQRVSYTLDAVSTHVRIDCITETHAIEIGLDHTRGSYDSLHQATFNAMLTDREPMVILIDTD TYESQYEYQIETVARAHGVDYAVWDEHFLIRWQMTAPFRARLADHR
Sequences:
>Translated_126_residues MTEAQAIAILCAMLGGEPEQRVSYTLDAVSTHVRIDCITETHAIEIGLDHTRGSYDSLHQATFNAMLTDREPMVILIDTD TYESQYEYQIETVARAHGVDYAVWDEHFLIRWQMTAPFRARLADHR >Mature_125_residues TEAQAIAILCAMLGGEPEQRVSYTLDAVSTHVRIDCITETHAIEIGLDHTRGSYDSLHQATFNAMLTDREPMVILIDTDT YESQYEYQIETVARAHGVDYAVWDEHFLIRWQMTAPFRARLADHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14428; Mature: 14297
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAQAIAILCAMLGGEPEQRVSYTLDAVSTHVRIDCITETHAIEIGLDHTRGSYDSLHQ CCCHHHHHHHHHHHCCCCCHHHEEEEECCCEEEEEEEEECCEEEEEECCCCCCCHHHHHH ATFNAMLTDREPMVILIDTDTYESQYEYQIETVARAHGVDYAVWDEHFLIRWQMTAPFRA HHHHHEECCCCCEEEEEECCCCCCEEEEEHEEHHHHCCCEEEEECCEEEEEEEECCCHHH RLADHR HCCCCC >Mature Secondary Structure TEAQAIAILCAMLGGEPEQRVSYTLDAVSTHVRIDCITETHAIEIGLDHTRGSYDSLHQ CCHHHHHHHHHHHCCCCCHHHEEEEECCCEEEEEEEEECCEEEEEECCCCCCCHHHHHH ATFNAMLTDREPMVILIDTDTYESQYEYQIETVARAHGVDYAVWDEHFLIRWQMTAPFRA HHHHHEECCCCCEEEEEECCCCCCEEEEEHEEHHHHCCCEEEEECCEEEEEEEECCCHHH RLADHR HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA