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The map label for this gene is yfiO [C]

Identifier: 89055239

GI number: 89055239

Start: 2763311

End: 2764219

Strand: Reverse

Name: yfiO [C]

Synonym: Jann_2748

Alternate gene names: 89055239

Gene position: 2764219-2763311 (Counterclockwise)

Preceding gene: 89055240

Following gene: 89055238

Centisome position: 64.02

GC content: 62.27

Gene sequence:

>909_bases
ATGACCATCAACCGCGTTCGTCTTTCCGGTGCGGCCCTCGGGCTGACTTTGGTCCTTGCGGGCTGCGGCGGTGGCGGCGG
AGGCAATGGTGGCCTTCTCGGAACCGGTTTGTTCAGCGGTGGTGGAGGCGGTGGCTTCTTTGCCGGGCGCAACGCCAATG
TGCCTCTGGAGCAGCTGGATGCCGAGACAATCTACCAGCAGGCCGAGTTTGAGCTGGAGCGCGGTCGCGCCGACAATGCC
GCCGAGCTGTTCATCGAAGTGGAGCGTCTGCACCCCTATTCGGCCTGGGCCGAGCGTGCGTTGATCATGGCGGCGTTCGC
CTACCACGAGGATGGCGATTATGAGGCCGCGCGCGTCGCCGCCCAACGCTATCTTGATTTCTACCCCGGCAATGAAGACG
CGGCCTATGCGCAATATCTTCTGGCGCTCAGCTACTATGATCAGATCGATCAGGTTGGCCGCGACCAGGGCGTGACCTTC
CAGGCGTTGCAGGCCCTGCGGGTGGTGATCGAACGCTATCCCGACAGCGACTACGTCCAGGATGCGATCTTGCGGTTCGA
CCTCGCCTTTGACCATCTGGCGGGCAAGGAAATGGAAGTCGGGCGCTATTATCTGCGTCGGGAGCATTACACCTCCGCCA
TCAACCGCTTCCGCGTTGTCGTTGAAGAATTTCAGACCACGAGCCATACGCCCGAGGCGCTGTTGCGGCTGGTTGAGGCG
TATCTGGCCCTCGGTCTGACCGATGAGGCGCAGACAGCCGGCGCGATCCTGGGCTACAACTTCCAGTCCTCACCCTTCTA
CGATGATGCCTTCCGTCAATTGACGGGGCAGGGCCTGTCGCTGGAGGCCGCCGGTGAAAACTGGTTGCGGGAAGTCTGGC
AGCAAACGGTGCGGGGCGACTGGCTGTAG

Upstream 100 bases:

>100_bases
TCTGCGTCGGTTGAGGGATTTTGCCCGCAAAAGGAATGTGCTAGAGCGGTGCCAAGAGGATCCGGACCGGGTCCCGAGTA
TTGGGTTCGAGGCTATCTGT

Downstream 100 bases:

>100_bases
GCGCTTAGTCAGCCCCTCTTGACCGCAGTGCCGGGTTAGGCAACACACGATCTATGCTGCGTCATCTCGATATCCGCGAC
ATGTTGATCATTGACCGGCT

Product: competence lipoprotein ComL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTINRVRLSGAALGLTLVLAGCGGGGGGNGGLLGTGLFSGGGGGGFFAGRNANVPLEQLDAETIYQQAEFELERGRADNA
AELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTF
QALQALRVVIERYPDSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEA
YLALGLTDEAQTAGAILGYNFQSSPFYDDAFRQLTGQGLSLEAAGENWLREVWQQTVRGDWL

Sequences:

>Translated_302_residues
MTINRVRLSGAALGLTLVLAGCGGGGGGNGGLLGTGLFSGGGGGGFFAGRNANVPLEQLDAETIYQQAEFELERGRADNA
AELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTF
QALQALRVVIERYPDSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEA
YLALGLTDEAQTAGAILGYNFQSSPFYDDAFRQLTGQGLSLEAAGENWLREVWQQTVRGDWL
>Mature_301_residues
TINRVRLSGAALGLTLVLAGCGGGGGGNGGLLGTGLFSGGGGGGFFAGRNANVPLEQLDAETIYQQAEFELERGRADNAA
ELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQ
ALQALRVVIERYPDSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEAY
LALGLTDEAQTAGAILGYNFQSSPFYDDAFRQLTGQGLSLEAAGENWLREVWQQTVRGDWL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=268, Percent_Identity=22.7611940298507, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33416; Mature: 33284

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINRVRLSGAALGLTLVLAGCGGGGGGNGGLLGTGLFSGGGGGGFFAGRNANVPLEQLD
CCCCEEEECHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AETIYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYPDSDYVQ
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
DAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YLALGLTDEAQTAGAILGYNFQSSPFYDDAFRQLTGQGLSLEAAGENWLREVWQQTVRGD
HHHHCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCC
WL
CC
>Mature Secondary Structure 
TINRVRLSGAALGLTLVLAGCGGGGGGNGGLLGTGLFSGGGGGGFFAGRNANVPLEQLD
CCCEEEECHHHHHHHHHEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AETIYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYPDSDYVQ
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
DAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YLALGLTDEAQTAGAILGYNFQSSPFYDDAFRQLTGQGLSLEAAGENWLREVWQQTVRGD
HHHHCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCC
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]