Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 89055238

GI number: 89055238

Start: 2761608

End: 2763257

Strand: Reverse

Name: recN [H]

Synonym: Jann_2747

Alternate gene names: 89055238

Gene position: 2763257-2761608 (Counterclockwise)

Preceding gene: 89055239

Following gene: 89055237

Centisome position: 63.99

GC content: 64.85

Gene sequence:

>1650_bases
ATGCTGCGTCATCTCGATATCCGCGACATGTTGATCATTGACCGGCTGGAACTTGCATTCCAGCCCGGGCTCAATGTGTT
GACCGGGGAAACGGGCGCAGGCAAATCCATCCTTCTCGATAGCCTCGGCTTCGTGCTTGGCTGGCGCGGGCGCGCTGATC
TTGTCCGCGCAGGTGCGGCGCAGGGAGAGGTGGTGGCAGAGTTCGACCTGCCCGACGATCATCCCGCTTTGGTCGTTCTG
GAGGAGGCGGGCCTTCCGATCTCGGACGAGCTGATCCTGCGCCGCATCAACACGCCTGAGGGGCGCAAGACCGCTTGGGT
CAATGACCGGCGCGTCAGTGGCGAGGTTTTGCGCGCCCTTTCAGATGTGTTGGTCGAATTGCATGGGCAGCAAGATGACA
GGGGCCTGTTGGATCCCAAAAACCACCGCACGATGCTGGATGATTTCGGCGGGCTGAACGGTTTGCGTGCCGCAGTCTCA
ACGGCTTGGCGCACAAAGTCGGCCGCCAGTAAAGCCTTGGCCACGGCCGAGGTGCGGCTGGCGGAGATGCGGGAGGAAGA
GGATTTCCTGCGTCATTCCGTGGCAGAACTGAGCAAGCTCGCGCCCGAGCCCGGCGAAGAAGCGGATCTGGATGCCAAGC
GTCGGCTGATGCAGGCGGCGGAGAAGATGCGCGAGGATGTGGCGCAGGCGGTCACTGCGCTGGGGTTGAACGGGGCCGAA
GGCGCGATGAGTGATGCGGGTCGCTGGCTTGACGGCGTGGTGGAACACGCGGAGGGGCGCTTGGAATTGCCCATGGCCGC
ATTGGAGCGCGCGTTGGTGGAACTGGGCGAGGCGCAAGCCGGGATCGCCAGTTTTGCGGAGCGTTTAGAGTTCAACCCGT
CCGAGCTGGAGATGACGGAAGAGCGGCTCTTCGCGCTACGGGGCCTTGCGCGCAAGCACAATGTGCTGGCCGATGATCTG
GCCGGACTGGCGGAGACGTTGTCTGCCCGGTTGGCTGCATTGGACGGCGGAGAGACCGAGATTGCGGAGCTGATTAAGGC
GCGCGATGCGGCGGATGCGGCTTACAGGGGCGCGGCGGAGAAGCTCACCGCCGCCCGCGCGAAGGCGGCGACACGGCTCG
ACCGCGCCATGGGGGCGGAACTGGCCCCGTTGAAGATGGACCGCGCCGTGTTCGAGACCCGTCGGGACGAGGCGCCAGCC
GGACCCGACGGGGTCGATGCGATCACCTTCACGGTCGCGACCAACCCCGGCGCGCCCTCCGGGCCGCTCAATCGCATTGC
CTCCGGCGGGGAATTGTCACGCTTTCTGTTGGCGCTGAAGGTGTGTCTGACGTCTGATGCCGCCGGTTTGACGATGATCT
TTGATGAGATCGACCGCGGTGTCGGCGGAGCCACGGCGGATGCTGTAGGTCGGCGGTTGTCGGCCTTGGCTGATGGCGGC
CAGGTGCTGGTCGTGACGCATTCGCCCCAGGTCGCAGCCCTCGGTGCCCACCACTGGCAAGTGGCGAAATCGGTTGAGAA
GGGTGTCACCTTTAGCAGGGTCAAAGCCCTGTCCGAACAGGAGCGCGTGGATGAGGTCGCCCGGATGGTTGCGGGCGACA
CGATCACCGACGCGGCGCGCGATGCCGCACGGGAATTGTTGAAGGGATAG

Upstream 100 bases:

>100_bases
GGTTGCGGGAAGTCTGGCAGCAAACGGTGCGGGGCGACTGGCTGTAGGCGCTTAGTCAGCCCCTCTTGACCGCAGTGCCG
GGTTAGGCAACACACGATCT

Downstream 100 bases:

>100_bases
GCCGCGCCCTGGTCCGACAGCGCCGGAAGCGCACCGAATTCAACTGAAAGCAGTCAATTGCAAAGGCAGCGGCTTTTCAA
AGCCTTGGGCTTTGTCTACC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLRHLDIRDMLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRADLVRAGAAQGEVVAEFDLPDDHPALVVL
EEAGLPISDELILRRINTPEGRKTAWVNDRRVSGEVLRALSDVLVELHGQQDDRGLLDPKNHRTMLDDFGGLNGLRAAVS
TAWRTKSAASKALATAEVRLAEMREEEDFLRHSVAELSKLAPEPGEEADLDAKRRLMQAAEKMREDVAQAVTALGLNGAE
GAMSDAGRWLDGVVEHAEGRLELPMAALERALVELGEAQAGIASFAERLEFNPSELEMTEERLFALRGLARKHNVLADDL
AGLAETLSARLAALDGGETEIAELIKARDAADAAYRGAAEKLTAARAKAATRLDRAMGAELAPLKMDRAVFETRRDEAPA
GPDGVDAITFTVATNPGAPSGPLNRIASGGELSRFLLALKVCLTSDAAGLTMIFDEIDRGVGGATADAVGRRLSALADGG
QVLVVTHSPQVAALGAHHWQVAKSVEKGVTFSRVKALSEQERVDEVARMVAGDTITDAARDAARELLKG

Sequences:

>Translated_549_residues
MLRHLDIRDMLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRADLVRAGAAQGEVVAEFDLPDDHPALVVL
EEAGLPISDELILRRINTPEGRKTAWVNDRRVSGEVLRALSDVLVELHGQQDDRGLLDPKNHRTMLDDFGGLNGLRAAVS
TAWRTKSAASKALATAEVRLAEMREEEDFLRHSVAELSKLAPEPGEEADLDAKRRLMQAAEKMREDVAQAVTALGLNGAE
GAMSDAGRWLDGVVEHAEGRLELPMAALERALVELGEAQAGIASFAERLEFNPSELEMTEERLFALRGLARKHNVLADDL
AGLAETLSARLAALDGGETEIAELIKARDAADAAYRGAAEKLTAARAKAATRLDRAMGAELAPLKMDRAVFETRRDEAPA
GPDGVDAITFTVATNPGAPSGPLNRIASGGELSRFLLALKVCLTSDAAGLTMIFDEIDRGVGGATADAVGRRLSALADGG
QVLVVTHSPQVAALGAHHWQVAKSVEKGVTFSRVKALSEQERVDEVARMVAGDTITDAARDAARELLKG
>Mature_549_residues
MLRHLDIRDMLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRADLVRAGAAQGEVVAEFDLPDDHPALVVL
EEAGLPISDELILRRINTPEGRKTAWVNDRRVSGEVLRALSDVLVELHGQQDDRGLLDPKNHRTMLDDFGGLNGLRAAVS
TAWRTKSAASKALATAEVRLAEMREEEDFLRHSVAELSKLAPEPGEEADLDAKRRLMQAAEKMREDVAQAVTALGLNGAE
GAMSDAGRWLDGVVEHAEGRLELPMAALERALVELGEAQAGIASFAERLEFNPSELEMTEERLFALRGLARKHNVLADDL
AGLAETLSARLAALDGGETEIAELIKARDAADAAYRGAAEKLTAARAKAATRLDRAMGAELAPLKMDRAVFETRRDEAPA
GPDGVDAITFTVATNPGAPSGPLNRIASGGELSRFLLALKVCLTSDAAGLTMIFDEIDRGVGGATADAVGRRLSALADGG
QVLVVTHSPQVAALGAHHWQVAKSVEKGVTFSRVKALSEQERVDEVARMVAGDTITDAARDAARELLKG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=32.1880650994575, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 58592; Mature: 58592

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLDIRDMLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRADLVRAGAA
CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGEVVAEFDLPDDHPALVVLEEAGLPISDELILRRINTPEGRKTAWVNDRRVSGEVLRAL
CCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
SDVLVELHGQQDDRGLLDPKNHRTMLDDFGGLNGLRAAVSTAWRTKSAASKALATAEVRL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEMREEEDFLRHSVAELSKLAPEPGEEADLDAKRRLMQAAEKMREDVAQAVTALGLNGAE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAMSDAGRWLDGVVEHAEGRLELPMAALERALVELGEAQAGIASFAERLEFNPSELEMTE
CCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
ERLFALRGLARKHNVLADDLAGLAETLSARLAALDGGETEIAELIKARDAADAAYRGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLTAARAKAATRLDRAMGAELAPLKMDRAVFETRRDEAPAGPDGVDAITFTVATNPGAPS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
GPLNRIASGGELSRFLLALKVCLTSDAAGLTMIFDEIDRGVGGATADAVGRRLSALADGG
CHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
QVLVVTHSPQVAALGAHHWQVAKSVEKGVTFSRVKALSEQERVDEVARMVAGDTITDAAR
EEEEEECCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DAARELLKG
HHHHHHHCC
>Mature Secondary Structure
MLRHLDIRDMLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRADLVRAGAA
CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
QGEVVAEFDLPDDHPALVVLEEAGLPISDELILRRINTPEGRKTAWVNDRRVSGEVLRAL
CCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
SDVLVELHGQQDDRGLLDPKNHRTMLDDFGGLNGLRAAVSTAWRTKSAASKALATAEVRL
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEMREEEDFLRHSVAELSKLAPEPGEEADLDAKRRLMQAAEKMREDVAQAVTALGLNGAE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAMSDAGRWLDGVVEHAEGRLELPMAALERALVELGEAQAGIASFAERLEFNPSELEMTE
CCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
ERLFALRGLARKHNVLADDLAGLAETLSARLAALDGGETEIAELIKARDAADAAYRGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLTAARAKAATRLDRAMGAELAPLKMDRAVFETRRDEAPAGPDGVDAITFTVATNPGAPS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
GPLNRIASGGELSRFLLALKVCLTSDAAGLTMIFDEIDRGVGGATADAVGRRLSALADGG
CHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
QVLVVTHSPQVAALGAHHWQVAKSVEKGVTFSRVKALSEQERVDEVARMVAGDTITDAAR
EEEEEECCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DAARELLKG
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA