| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89055228
Identifier: 89055228
GI number: 89055228
Start: 2751193
End: 2751504
Strand: Direct
Name: 89055228
Synonym: Jann_2737
Alternate gene names: NA
Gene position: 2751193-2751504 (Clockwise)
Preceding gene: 89055227
Following gene: 89055229
Centisome position: 63.71
GC content: 53.53
Gene sequence:
>312_bases ATGGCAAAACATGGCCGATCCTCACGATTATTTGAGTTTGTTAACACTTTGTTTGTGAACGCGCGCCATGTTAGGTGGAT GAACGGGACATTGCACCTTCTCCTGGCCGGGTTCACAGCTGGCATTCTCGCCGCCGCGATGGCTTTCGTTGCCGATTTCA GCTGGCTTGCAGCCTTCGGCTTCTACGTTCTGGGCGGGAATATCGGTCTGCTTTTTACCGCTATGCTGATGGCCCGGGCA AGGTCCGATACGGATATTGAAGCCCACACGATTGAGGCCTATAGCGCAAAGGCTTGCACTGAAGAGGGTTGA
Upstream 100 bases:
>100_bases AAGCCAGGAAATCGCCCGCCGTATCGAGGGTCGGCCGGCGCCCGCGGGCGCTGCAGATCCCTGCGCGGGTCTGTAGCTGT GAGCCGAATACCGCCGGGCG
Downstream 100 bases:
>100_bases CGCGCCTGCAAACGGCGCCGTTTCTCCACCCGATTGACGCGGCCCGCCGCCGCGGTCATCGTCCGGTCATGATCCATCCA AATTCAGATGCCATCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARA RSDTDIEAHTIEAYSAKACTEEG
Sequences:
>Translated_103_residues MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARA RSDTDIEAHTIEAYSAKACTEEG >Mature_102_residues AKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFGFYVLGGNIGLLFTAMLMARAR SDTDIEAHTIEAYSAKACTEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11232; Mature: 11101
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFG CCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVLGGNIGLLFTAMLMARARSDTDIEAHTIEAYSAKACTEEG HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure AKHGRSSRLFEFVNTLFVNARHVRWMNGTLHLLLAGFTAGILAAAMAFVADFSWLAAFG CCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYVLGGNIGLLFTAMLMARARSDTDIEAHTIEAYSAKACTEEG HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA