Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055183

Identifier: 89055183

GI number: 89055183

Start: 2701837

End: 2703003

Strand: Reverse

Name: 89055183

Synonym: Jann_2692

Alternate gene names: NA

Gene position: 2703003-2701837 (Counterclockwise)

Preceding gene: 89055184

Following gene: 89055182

Centisome position: 62.6

GC content: 68.55

Gene sequence:

>1167_bases
ATGTCTGACCCCAAGCAGAGATCTGTTTTATCGCGCATCGTTGCGGCCCATTTGCGGGGCGGAACCGATGTGGCGGCCCT
GGAGCCGGGCTTGCAAACGGGCCTGACGCGCGCAATCCGCCGCGCCTCGCTGCCGTATGCGGTGCTGGCCCCACAGGTGG
AGGATGCCGCCGTCACATCGGGGGCCTCGCTACAGGACGCGCTGGACACTATGCCGGAGCAGGGGCTGACCGCCGCCGTG
GAGGATGCGGAGGGACGGCGCGGTCTGGTCGCGCTGGATCATCCGCTGGTGGATGCGCTGATCGAGGTGCAGGCCACCGG
CGAGGTGGAGAAAACCAATCACCCCGCGCGCAAGGTCACCCGCATTGATGAGGCGCTCTGCCGGGACTTCCTGGACCTTG
TGTTGGCGGCCTTTGCCCAGGAAACGGCAGGCCAGGCGGGTCGCGACTGGCCCGACCGGATGCGCTATGGCTCCATCATC
ACGGAGCGGGCGCAGCTGAACCTGCTGATGCCTGAGCGTGGCTACAGGGTCTTGCGCACCTCTGTCACGATGGGCGGTCA
CAAGACCGGCGATCTTGTGTTGGTCCTTCCCAGTGACCCCGCCATTGCGCGCCGGGGCGGCTCGGTTGAGCAGCCGTCCG
CGCCGGCGGAGGCCCCCAAGGGCTGGGGCGACCGGATGCTGGGCGCGATCAGCACCGCCCCCATGGCGCTGGATGCGGTT
TTGATGCGCACAATCATGCCGCTGGGCAAGGTGGAGGACCTGGCGCAGGGGGATCTGGTGCCCTTCGATCACAACGATCT
GAGTGCGATCAGCCTGGAAGATGAAATCGGCCATGTCTTCGCGCGCGGGGCTTTGGGGCAGGTCTCGGGGCGCCGGGCGG
TCCGCTTTGGCGACGGGGAGGGGGCGCAACCGGCCCCGGCCAAACCGCCCTCATTGGTGTCCGGCCCGGCAGAGGCACCC
GCTGCGGCCCGCCCGCCGCAAAATGGCACGCCGCCCACCCCTGCAAAACCGGGGCCAGCGCCAGTCCCGCCGCAAAAGCC
AGCCGCCGCACCGGCAGCTTTCGATCCCGACGCCCCCATGGGTGACTTTGACCCGGACGCGCCGATGGGCGGGTTTGACC
CCGATGCGCCGATGGAAGAGTTCGACCCCAACGCTGCCATCGGTTAG

Upstream 100 bases:

>100_bases
GCAATTGTCGGTGGCATCTTTACGGGCTGCGTAAGGGTTTTGTTAACGGCTTTTGTGCGATGTCTGGCGGATGTGATCCG
TCTAAAGGCCCCGCCCGTCC

Downstream 100 bases:

>100_bases
CACCGGCTGAGCCCCGCGCCGGACGCCAGCGAAAGCGCCCTCGCGCGCCCCGGGAACAGCCGCCGGGCGTGCACTCCCCT
CCAGATGTTGCAATTCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Flagellar Switch Protein FliM; Surface Presentation Of Antigens Protein Family

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSDPKQRSVLSRIVAAHLRGGTDVAALEPGLQTGLTRAIRRASLPYAVLAPQVEDAAVTSGASLQDALDTMPEQGLTAAV
EDAEGRRGLVALDHPLVDALIEVQATGEVEKTNHPARKVTRIDEALCRDFLDLVLAAFAQETAGQAGRDWPDRMRYGSII
TERAQLNLLMPERGYRVLRTSVTMGGHKTGDLVLVLPSDPAIARRGGSVEQPSAPAEAPKGWGDRMLGAISTAPMALDAV
LMRTIMPLGKVEDLAQGDLVPFDHNDLSAISLEDEIGHVFARGALGQVSGRRAVRFGDGEGAQPAPAKPPSLVSGPAEAP
AAARPPQNGTPPTPAKPGPAPVPPQKPAAAPAAFDPDAPMGDFDPDAPMGGFDPDAPMEEFDPNAAIG

Sequences:

>Translated_388_residues
MSDPKQRSVLSRIVAAHLRGGTDVAALEPGLQTGLTRAIRRASLPYAVLAPQVEDAAVTSGASLQDALDTMPEQGLTAAV
EDAEGRRGLVALDHPLVDALIEVQATGEVEKTNHPARKVTRIDEALCRDFLDLVLAAFAQETAGQAGRDWPDRMRYGSII
TERAQLNLLMPERGYRVLRTSVTMGGHKTGDLVLVLPSDPAIARRGGSVEQPSAPAEAPKGWGDRMLGAISTAPMALDAV
LMRTIMPLGKVEDLAQGDLVPFDHNDLSAISLEDEIGHVFARGALGQVSGRRAVRFGDGEGAQPAPAKPPSLVSGPAEAP
AAARPPQNGTPPTPAKPGPAPVPPQKPAAAPAAFDPDAPMGDFDPDAPMGGFDPDAPMEEFDPNAAIG
>Mature_387_residues
SDPKQRSVLSRIVAAHLRGGTDVAALEPGLQTGLTRAIRRASLPYAVLAPQVEDAAVTSGASLQDALDTMPEQGLTAAVE
DAEGRRGLVALDHPLVDALIEVQATGEVEKTNHPARKVTRIDEALCRDFLDLVLAAFAQETAGQAGRDWPDRMRYGSIIT
ERAQLNLLMPERGYRVLRTSVTMGGHKTGDLVLVLPSDPAIARRGGSVEQPSAPAEAPKGWGDRMLGAISTAPMALDAVL
MRTIMPLGKVEDLAQGDLVPFDHNDLSAISLEDEIGHVFARGALGQVSGRRAVRFGDGEGAQPAPAKPPSLVSGPAEAPA
AARPPQNGTPPTPAKPGPAPVPPQKPAAAPAAFDPDAPMGDFDPDAPMGGFDPDAPMEEFDPNAAIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40498; Mature: 40367

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPKQRSVLSRIVAAHLRGGTDVAALEPGLQTGLTRAIRRASLPYAVLAPQVEDAAVTS
CCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCC
GASLQDALDTMPEQGLTAAVEDAEGRRGLVALDHPLVDALIEVQATGEVEKTNHPARKVT
CCHHHHHHHHCCCCCCEEHHHCCCCCCCEEEECHHHHHHHHHHHCCCCHHHCCCHHHHHH
RIDEALCRDFLDLVLAAFAQETAGQAGRDWPDRMRYGSIITERAQLNLLMPERGYRVLRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEE
SVTMGGHKTGDLVLVLPSDPAIARRGGSVEQPSAPAEAPKGWGDRMLGAISTAPMALDAV
EHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMRTIMPLGKVEDLAQGDLVPFDHNDLSAISLEDEIGHVFARGALGQVSGRRAVRFGDGE
HHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCCCEEEEECCCC
GAQPAPAKPPSLVSGPAEAPAAARPPQNGTPPTPAKPGPAPVPPQKPAAAPAAFDPDAPM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDFDPDAPMGGFDPDAPMEEFDPNAAIG
CCCCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SDPKQRSVLSRIVAAHLRGGTDVAALEPGLQTGLTRAIRRASLPYAVLAPQVEDAAVTS
CCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCC
GASLQDALDTMPEQGLTAAVEDAEGRRGLVALDHPLVDALIEVQATGEVEKTNHPARKVT
CCHHHHHHHHCCCCCCEEHHHCCCCCCCEEEECHHHHHHHHHHHCCCCHHHCCCHHHHHH
RIDEALCRDFLDLVLAAFAQETAGQAGRDWPDRMRYGSIITERAQLNLLMPERGYRVLRT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEE
SVTMGGHKTGDLVLVLPSDPAIARRGGSVEQPSAPAEAPKGWGDRMLGAISTAPMALDAV
EHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LMRTIMPLGKVEDLAQGDLVPFDHNDLSAISLEDEIGHVFARGALGQVSGRRAVRFGDGE
HHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCCCEEEEECCCC
GAQPAPAKPPSLVSGPAEAPAAARPPQNGTPPTPAKPGPAPVPPQKPAAAPAAFDPDAPM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDFDPDAPMGGFDPDAPMEEFDPNAAIG
CCCCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA