| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pksS [H]
Identifier: 89055161
GI number: 89055161
Start: 2680813
End: 2682039
Strand: Direct
Name: pksS [H]
Synonym: Jann_2670
Alternate gene names: 89055161
Gene position: 2680813-2682039 (Clockwise)
Preceding gene: 89055158
Following gene: 89055162
Centisome position: 62.08
GC content: 65.28
Gene sequence:
>1227_bases ATGTTGAGAAAATGGGCACGTTTCATGGTCTATAAGCTGAACGATCCTGCCTTCCTGGAAAACCCTGCTGACCAATTGGC CCGCATGCGCGCCGAAGGCCCGTTGGTGCGCATGAAGATCCCGTTGCTTGGGACGATGTGGGCCACCACGACCGACGAGG CGACGCGCAAGCTGCTGAAATCCCCCGATCTCTTCCGCCGCGATCCGGGGCCCATCACGGGCCGGTCACTGGCGCAGAAG TTCTGGTGGTTGCCCCGGGTGATCAAGCCGATGTTGCACACGATGATTGTCACCGACGATCCGGCCCATGCACGGCAACG GCGGTTGGTGGAGATCGCCTTCGCGCGCACCAGCATCGAGGATATGCGCCCGAGGATCGAGGCGATTGCCCATCGTCTGC TGGACGCTCTGCCCCAAACTGGCCCCGTCGACATCGTCGCCCATTACACGCGTCAGCTGCCGTTCCTGGCGATCTGCGAG CTTCTGGGTATCCCGGAATCCGCCCACGCCGCTCTGACCAGGCGCATCGCGCCGCTGAGCGCTGTGTCCAACCCCATCAC CGCCGTCTACGCCATGGCGCGTCTTGGCGGGGTGCAGCGCGATTTCCACGCGATGTTTGCGCGCGCCCGAGCCGAACCGC CCGGCCCCGGGCTAATCTCGGCGCTGGTGCACACCGATGACAATGGTGCGAAGCTGAGTGAGGAGGAACTCCTGTCCCTC ACGCTCCTGCTGTTTCTCGCGGGCCATGAGACGACCGTGCATCTGATCAACGCCGGGATCGTGGCTCTGGCAGGCGATGC CGCGCTCACCCGCCACTTCATCAACACCCCCGACACCCGGCATTTGTTTGTTGAGGAGATCATGCGATCCACGACGCCGG TGACGCTGACCAAACCGATGTTCGCGGCGCAAGACACGGATGTGCTGGGGGCGAACATCCGGAAAGGGGAGATGGTCGCG GCCCTTCTGATCGCGGCCAACCATGATCCTGACCGCGTCGATGCCCCGCAGGAGCTACGGCCCGAGCGGCGGCCCAACGC GCATCTGGGCTTCGGGTTCGGTCCCCACGTTTGCCTTGGCATGCAACTCGCGCGGGTCGAGGCGGTCACGGCGCTGACAG CGCTATTCGCCCGCCACCCCGACCTCCGTCTTGCGCGCCCGCCGGGATGGCTCAACCGCGCGGGGTTTCGCGCGCCGGGA CGTGTTGTGCTGGACCTGCGGCGCTGA
Upstream 100 bases:
>100_bases GTCATACTGCGTCCAAATTCGTGATACACCAGCATAGGTAGCGGTCGCAGCCCCCAAGGAAAAGAGACTTTGCCGCGCAA AGGGCCGCGCATCTGCGCAC
Downstream 100 bases:
>100_bases CTTCTTATCGCCCGAAGGGCGCAACTCGGGCCCGAAGGGCCACCGCGCCCGAGCGAAGCGAGGGCGCCACACGCAGAATT TATGCGCCTGCACCCCGGCA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MLRKWARFMVYKLNDPAFLENPADQLARMRAEGPLVRMKIPLLGTMWATTTDEATRKLLKSPDLFRRDPGPITGRSLAQK FWWLPRVIKPMLHTMIVTDDPAHARQRRLVEIAFARTSIEDMRPRIEAIAHRLLDALPQTGPVDIVAHYTRQLPFLAICE LLGIPESAHAALTRRIAPLSAVSNPITAVYAMARLGGVQRDFHAMFARARAEPPGPGLISALVHTDDNGAKLSEEELLSL TLLLFLAGHETTVHLINAGIVALAGDAALTRHFINTPDTRHLFVEEIMRSTTPVTLTKPMFAAQDTDVLGANIRKGEMVA ALLIAANHDPDRVDAPQELRPERRPNAHLGFGFGPHVCLGMQLARVEAVTALTALFARHPDLRLARPPGWLNRAGFRAPG RVVLDLRR
Sequences:
>Translated_408_residues MLRKWARFMVYKLNDPAFLENPADQLARMRAEGPLVRMKIPLLGTMWATTTDEATRKLLKSPDLFRRDPGPITGRSLAQK FWWLPRVIKPMLHTMIVTDDPAHARQRRLVEIAFARTSIEDMRPRIEAIAHRLLDALPQTGPVDIVAHYTRQLPFLAICE LLGIPESAHAALTRRIAPLSAVSNPITAVYAMARLGGVQRDFHAMFARARAEPPGPGLISALVHTDDNGAKLSEEELLSL TLLLFLAGHETTVHLINAGIVALAGDAALTRHFINTPDTRHLFVEEIMRSTTPVTLTKPMFAAQDTDVLGANIRKGEMVA ALLIAANHDPDRVDAPQELRPERRPNAHLGFGFGPHVCLGMQLARVEAVTALTALFARHPDLRLARPPGWLNRAGFRAPG RVVLDLRR >Mature_408_residues MLRKWARFMVYKLNDPAFLENPADQLARMRAEGPLVRMKIPLLGTMWATTTDEATRKLLKSPDLFRRDPGPITGRSLAQK FWWLPRVIKPMLHTMIVTDDPAHARQRRLVEIAFARTSIEDMRPRIEAIAHRLLDALPQTGPVDIVAHYTRQLPFLAICE LLGIPESAHAALTRRIAPLSAVSNPITAVYAMARLGGVQRDFHAMFARARAEPPGPGLISALVHTDDNGAKLSEEELLSL TLLLFLAGHETTVHLINAGIVALAGDAALTRHFINTPDTRHLFVEEIMRSTTPVTLTKPMFAAQDTDVLGANIRKGEMVA ALLIAANHDPDRVDAPQELRPERRPNAHLGFGFGPHVCLGMQLARVEAVTALTALFARHPDLRLARPPGWLNRAGFRAPG RVVLDLRR
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45258; Mature: 45258
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKWARFMVYKLNDPAFLENPADQLARMRAEGPLVRMKIPLLGTMWATTTDEATRKLLK CCCHHEEEEEEECCCCHHHCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHC SPDLFRRDPGPITGRSLAQKFWWLPRVIKPMLHTMIVTDDPAHARQRRLVEIAFARTSIE CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH DMRPRIEAIAHRLLDALPQTGPVDIVAHYTRQLPFLAICELLGIPESAHAALTRRIAPLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH AVSNPITAVYAMARLGGVQRDFHAMFARARAEPPGPGLISALVHTDDNGAKLSEEELLSL HHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHEEEECCCCCCCCHHHHHHH TLLLFLAGHETTVHLINAGIVALAGDAALTRHFINTPDTRHLFVEEIMRSTTPVTLTKPM HHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCC FAAQDTDVLGANIRKGEMVAALLIAANHDPDRVDAPQELRPERRPNAHLGFGFGPHVCLG HHCCCCCHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH MQLARVEAVTALTALFARHPDLRLARPPGWLNRAGFRAPGRVVLDLRR HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MLRKWARFMVYKLNDPAFLENPADQLARMRAEGPLVRMKIPLLGTMWATTTDEATRKLLK CCCHHEEEEEEECCCCHHHCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHC SPDLFRRDPGPITGRSLAQKFWWLPRVIKPMLHTMIVTDDPAHARQRRLVEIAFARTSIE CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH DMRPRIEAIAHRLLDALPQTGPVDIVAHYTRQLPFLAICELLGIPESAHAALTRRIAPLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH AVSNPITAVYAMARLGGVQRDFHAMFARARAEPPGPGLISALVHTDDNGAKLSEEELLSL HHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEHEEEECCCCCCCCHHHHHHH TLLLFLAGHETTVHLINAGIVALAGDAALTRHFINTPDTRHLFVEEIMRSTTPVTLTKPM HHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCC FAAQDTDVLGANIRKGEMVAALLIAANHDPDRVDAPQELRPERRPNAHLGFGFGPHVCLG HHCCCCCHHCCCCCCHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH MQLARVEAVTALTALFARHPDLRLARPPGWLNRAGFRAPGRVVLDLRR HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]