| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055130
Identifier: 89055130
GI number: 89055130
Start: 2653576
End: 2653965
Strand: Reverse
Name: 89055130
Synonym: Jann_2639
Alternate gene names: NA
Gene position: 2653965-2653576 (Counterclockwise)
Preceding gene: 89055131
Following gene: 89055129
Centisome position: 61.46
GC content: 65.13
Gene sequence:
>390_bases GTGCGCTCGGATATGATGTGCGCCATGAAGGTCGGACACAGATATCGCGATTGGCGGGCGTTCCATCGTCCCAAACCGAA CCCGCGTGCCTTCACGCCCAAGTTTCTGTGCCCGGCATGCCGACGCCTGTTCAACCGCCCCTCCACCGGCGACCAAACCC AGCGCCCTTGCCCCAATTGCGGCGGCACTGCGCTGCGCATGGGACGCAATTTTCGCCCGCCACCGCTTTCAGACGCCCGC CGCTGGAAGGTGGTGCTGTTTCTGGTCGAACACGGGTTTCGTTATGGCCGATACATGCCGGGTCCGATGCCGCAAACCAT GGGCGCGGCCCGACGCTACGTCGCGCGCTGTCGCCCGGACGCGGGCAGGTCGGGCGAGCGATACTTTTGA
Upstream 100 bases:
>100_bases GAGCCCGTGGGCATCGCCTTGCCCGACGGGATCACGCATCTGTTCGATGCCACGACTGGCGCGCGGATCGGGTAACGAAT GCCCTACTTTTCGGCGGCGG
Downstream 100 bases:
>100_bases ACCCGACCACGTTGGTGTTCCGGACATAATCAGGACAGGAGATTGGCATGAAAGGTAGCCGCCCCGAACAGGCCGTGCTG TCGCGCGACACCGATATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MRSDMMCAMKVGHRYRDWRAFHRPKPNPRAFTPKFLCPACRRLFNRPSTGDQTQRPCPNCGGTALRMGRNFRPPPLSDAR RWKVVLFLVEHGFRYGRYMPGPMPQTMGAARRYVARCRPDAGRSGERYF
Sequences:
>Translated_129_residues MRSDMMCAMKVGHRYRDWRAFHRPKPNPRAFTPKFLCPACRRLFNRPSTGDQTQRPCPNCGGTALRMGRNFRPPPLSDAR RWKVVLFLVEHGFRYGRYMPGPMPQTMGAARRYVARCRPDAGRSGERYF >Mature_129_residues MRSDMMCAMKVGHRYRDWRAFHRPKPNPRAFTPKFLCPACRRLFNRPSTGDQTQRPCPNCGGTALRMGRNFRPPPLSDAR RWKVVLFLVEHGFRYGRYMPGPMPQTMGAARRYVARCRPDAGRSGERYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15067; Mature: 15067
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDMMCAMKVGHRYRDWRAFHRPKPNPRAFTPKFLCPACRRLFNRPSTGDQTQRPCPNC CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC GGTALRMGRNFRPPPLSDARRWKVVLFLVEHGFRYGRYMPGPMPQTMGAARRYVARCRPD CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHCCCC AGRSGERYF CCCCCCCCC >Mature Secondary Structure MRSDMMCAMKVGHRYRDWRAFHRPKPNPRAFTPKFLCPACRRLFNRPSTGDQTQRPCPNC CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC GGTALRMGRNFRPPPLSDARRWKVVLFLVEHGFRYGRYMPGPMPQTMGAARRYVARCRPD CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHCCCC AGRSGERYF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA