| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055129
Identifier: 89055129
GI number: 89055129
Start: 2653004
End: 2653528
Strand: Reverse
Name: 89055129
Synonym: Jann_2638
Alternate gene names: NA
Gene position: 2653528-2653004 (Counterclockwise)
Preceding gene: 89055130
Following gene: 89055126
Centisome position: 61.45
GC content: 62.1
Gene sequence:
>525_bases ATGAAAGGTAGCCGCCCCGAACAGGCCGTGCTGTCGCGCGACACCGATATGGACAAGACCGAGGCCACCCGCGCGGTGAT CGAGGGGATGGTCGATGGCCTGAACGATCACCGGATCACCGATATTGGCGAGTTCTTTGCGGAGGGGTTTCGCTGGATGG GCAATCGCGGCTGCGGCACCAAGGAGGGACTGCGTGCGTTCCAGGACAATTGGCAAAAGCCGTTCCAGGCCGCGTTTTCG GACAAGGTGTGTGTCGATGAGGCGCGTCTTTACATGGGCGAATGGGCCGCAGCCTTTGGGCGGCAGGAAGCAACCCATTC GGGCCCGTTCATGGGCGTGGACGCCACCGGCAAGCGGGTCAACATTCGCTACATGGACTTCTGGAAGGTCGTCGACGGAA AAATCGTGGACAACTACGTGATGGTCGATTTCCCCGATGTTCTGGCGCAACTGGGTGTGGACGTCTTTGGCGGAGAAGGC TGGGAGGCGTTCGACGAGGGCCGCGCCGAGCCGCCCACGCCGTGA
Upstream 100 bases:
>100_bases ACGTCGCGCGCTGTCGCCCGGACGCGGGCAGGTCGGGCGAGCGATACTTTTGAACCCGACCACGTTGGTGTTCCGGACAT AATCAGGACAGGAGATTGGC
Downstream 100 bases:
>100_bases CTGTTCGTAAATAGAGCGGCATGCGCCGCATTCTTTTTCAAAAGAGCCGCCCCCCAGAGAGGGGCGGGAAGGGGCGCTGC CCCTTATGTGCATCTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG WEAFDEGRAEPPTP
Sequences:
>Translated_174_residues MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG WEAFDEGRAEPPTP >Mature_174_residues MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG WEAFDEGRAEPPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19456; Mature: 19456
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGT CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC KEGLRAFQDNWQKPFQAAFSDKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE NIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEGWEAFDEGRAEPPTP EEEEEHHHHHHCCEEECCEEEEECHHHHHHHCCEEECCCCCCHHHCCCCCCCCC >Mature Secondary Structure MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGT CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC KEGLRAFQDNWQKPFQAAFSDKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE NIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEGWEAFDEGRAEPPTP EEEEEHHHHHHCCEEECCEEEEECHHHHHHHCCEEECCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA