Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055129

Identifier: 89055129

GI number: 89055129

Start: 2653004

End: 2653528

Strand: Reverse

Name: 89055129

Synonym: Jann_2638

Alternate gene names: NA

Gene position: 2653528-2653004 (Counterclockwise)

Preceding gene: 89055130

Following gene: 89055126

Centisome position: 61.45

GC content: 62.1

Gene sequence:

>525_bases
ATGAAAGGTAGCCGCCCCGAACAGGCCGTGCTGTCGCGCGACACCGATATGGACAAGACCGAGGCCACCCGCGCGGTGAT
CGAGGGGATGGTCGATGGCCTGAACGATCACCGGATCACCGATATTGGCGAGTTCTTTGCGGAGGGGTTTCGCTGGATGG
GCAATCGCGGCTGCGGCACCAAGGAGGGACTGCGTGCGTTCCAGGACAATTGGCAAAAGCCGTTCCAGGCCGCGTTTTCG
GACAAGGTGTGTGTCGATGAGGCGCGTCTTTACATGGGCGAATGGGCCGCAGCCTTTGGGCGGCAGGAAGCAACCCATTC
GGGCCCGTTCATGGGCGTGGACGCCACCGGCAAGCGGGTCAACATTCGCTACATGGACTTCTGGAAGGTCGTCGACGGAA
AAATCGTGGACAACTACGTGATGGTCGATTTCCCCGATGTTCTGGCGCAACTGGGTGTGGACGTCTTTGGCGGAGAAGGC
TGGGAGGCGTTCGACGAGGGCCGCGCCGAGCCGCCCACGCCGTGA

Upstream 100 bases:

>100_bases
ACGTCGCGCGCTGTCGCCCGGACGCGGGCAGGTCGGGCGAGCGATACTTTTGAACCCGACCACGTTGGTGTTCCGGACAT
AATCAGGACAGGAGATTGGC

Downstream 100 bases:

>100_bases
CTGTTCGTAAATAGAGCGGCATGCGCCGCATTCTTTTTCAAAAGAGCCGCCCCCCAGAGAGGGGCGGGAAGGGGCGCTGC
CCCTTATGTGCATCTTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS
DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG
WEAFDEGRAEPPTP

Sequences:

>Translated_174_residues
MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS
DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG
WEAFDEGRAEPPTP
>Mature_174_residues
MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGTKEGLRAFQDNWQKPFQAAFS
DKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRVNIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEG
WEAFDEGRAEPPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19456; Mature: 19456

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGT
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KEGLRAFQDNWQKPFQAAFSDKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
NIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEGWEAFDEGRAEPPTP
EEEEEHHHHHHCCEEECCEEEEECHHHHHHHCCEEECCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MKGSRPEQAVLSRDTDMDKTEATRAVIEGMVDGLNDHRITDIGEFFAEGFRWMGNRGCGT
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KEGLRAFQDNWQKPFQAAFSDKVCVDEARLYMGEWAAAFGRQEATHSGPFMGVDATGKRV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
NIRYMDFWKVVDGKIVDNYVMVDFPDVLAQLGVDVFGGEGWEAFDEGRAEPPTP
EEEEEHHHHHHCCEEECCEEEEECHHHHHHHCCEEECCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA