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The map label for this gene is 89055095

Identifier: 89055095

GI number: 89055095

Start: 2619584

End: 2620747

Strand: Direct

Name: 89055095

Synonym: Jann_2604

Alternate gene names: NA

Gene position: 2619584-2620747 (Clockwise)

Preceding gene: 89055094

Following gene: 89055096

Centisome position: 60.67

GC content: 60.65

Gene sequence:

>1164_bases
ATGAACAAGCAAGTGAATTTCGATGAGCTGGAAGTTGGTTATGACGTCCCCGCGCTGCCCGGCATGGATGAGGCTGATAT
CCAGACTCCCTGCCTGGTGCTGGATCTGGACGCGCTGGAGCGGAACATCAAGAAGATGGGTGATTACGCACGCGAACACG
GGATGCGCCACAGGGTTCACGGCAAGATGCACAAGTCCGTTGATGTGGCCAAGTTGCAGGAAGAGCTTGGCGGGGCCTGC
GGTGTGTGCTGCCAAAAGGTGTCCGAGGCCGAGGTCTTCGCGCGTGGCGGGATCAAGGATGTCATGGTCTCCAACCAGGT
GACGGACCCGCAGAAGATCGACCGCTTGGCGCGCATGCCGAAGTTTGGCGCACGTGTGCTGTGTTGTGTGGACGATCCGG
CCAACGTGGCGGATCTGTCGGCGGCAGCCGTCAAGCACGGCACCCAGATCGAGGCGCTGGTGGAGATCGATTGCGGCGCG
GGCCGCTGCGGCGTGACCACGACGCAGGAGGTCGTGAACATCGCGAAGATGATCGACGCCGCCGAGGGCCTGAAGTTTGC
GGGCATCCAGGCCTACCAAGGCGCGATGCAGCACCTCGACAGCTATGACGAACGCGCGAGCAAGACCCAGGTCGCCATCG
ACATGGTCGAGGACGCGATTGCAGGCCTGAAGGCCAATGGGTTGGAATGTGATATCGTCGGTGGCGGCGGCACGGGCAGC
TACTACTTTGAAAGCAATTCGGGCGCGTTCAATGAGCTTCAGTGCGGGTCCTATGCGTTCATGGACGCGGATTATGGCCG
TATCCTCGACAAGGACGGCAAGCGCATCGACGACGGCGAATGGGAGAATGCGCTATTCATCCTGACATCCGTGATGAGCC
ATGCGAAGGCCGACAAAGCCATCGTAGACGCAGGCCTGAAAGCACAATCCGTCGACTCTGGGCTGCCAACGATCTATGGA
CGCGATGACGTGGAATACGTCAAATGCTCCGATGAGCATGGCGTGGTGATGGATCCGGACGGTGTGCTGAATGTGAACGA
CAAGCTGCGCCTGGTGCCCGGCCATTGTGATCCCACCTGCAACGTCCACGATTGGTATGTCGGCGTGCGCGGCGGCAAGG
TCGAGACGCTGTGGCCCGTGTCGGCGCGTGGCAAGGCGTATTGA

Upstream 100 bases:

>100_bases
TTCGCGGGCAAACGCGTGGGCGTGATCATTACGGGCGGCAATGTCGATCTCGACAAGCTGCCTTGGACCCAATGAACGAC
ACTTTGAAGGGAGTTCAGAG

Downstream 100 bases:

>100_bases
GGGCGTTTCGCCTGACGGCGACCCACCGGGGGACTGGTCCCCCGGACCCCCTAGAGGTGTAAAGCCAAGATGAAGGAGCC
GCGTTGGAAGGCGCGGCTCT

Product: D-3-hydroxyaspartate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNKQVNFDELEVGYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKSVDVAKLQEELGGAC
GVCCQKVSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKHGTQIEALVEIDCGA
GRCGVTTTQEVVNIAKMIDAAEGLKFAGIQAYQGAMQHLDSYDERASKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGS
YYFESNSGAFNELQCGSYAFMDADYGRILDKDGKRIDDGEWENALFILTSVMSHAKADKAIVDAGLKAQSVDSGLPTIYG
RDDVEYVKCSDEHGVVMDPDGVLNVNDKLRLVPGHCDPTCNVHDWYVGVRGGKVETLWPVSARGKAY

Sequences:

>Translated_387_residues
MNKQVNFDELEVGYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKSVDVAKLQEELGGAC
GVCCQKVSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKHGTQIEALVEIDCGA
GRCGVTTTQEVVNIAKMIDAAEGLKFAGIQAYQGAMQHLDSYDERASKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGS
YYFESNSGAFNELQCGSYAFMDADYGRILDKDGKRIDDGEWENALFILTSVMSHAKADKAIVDAGLKAQSVDSGLPTIYG
RDDVEYVKCSDEHGVVMDPDGVLNVNDKLRLVPGHCDPTCNVHDWYVGVRGGKVETLWPVSARGKAY
>Mature_387_residues
MNKQVNFDELEVGYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKSVDVAKLQEELGGAC
GVCCQKVSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKHGTQIEALVEIDCGA
GRCGVTTTQEVVNIAKMIDAAEGLKFAGIQAYQGAMQHLDSYDERASKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGS
YYFESNSGAFNELQCGSYAFMDADYGRILDKDGKRIDDGEWENALFILTSVMSHAKADKAIVDAGLKAQSVDSGLPTIYG
RDDVEYVKCSDEHGVVMDPDGVLNVNDKLRLVPGHCDPTCNVHDWYVGVRGGKVETLWPVSARGKAY

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 41787; Mature: 41787

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQVNFDELEVGYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVH
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GKMHKSVDVAKLQEELGGACGVCCQKVSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMP
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCC
KFGARVLCCVDDPANVADLSAAAVKHGTQIEALVEIDCGAGRCGVTTTQEVVNIAKMIDA
CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
AEGLKFAGIQAYQGAMQHLDSYDERASKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGS
HCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
YYFESNSGAFNELQCGSYAFMDADYGRILDKDGKRIDDGEWENALFILTSVMSHAKADKA
EEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IVDAGLKAQSVDSGLPTIYGRDDVEYVKCSDEHGVVMDPDGVLNVNDKLRLVPGHCDPTC
HHHCCCCHHCCCCCCCEEECCCCCEEEEECCCCCEEECCCCEEECCCCEEEECCCCCCCC
NVHDWYVGVRGGKVETLWPVSARGKAY
CCEEEEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MNKQVNFDELEVGYDVPALPGMDEADIQTPCLVLDLDALERNIKKMGDYAREHGMRHRVH
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GKMHKSVDVAKLQEELGGACGVCCQKVSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMP
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCC
KFGARVLCCVDDPANVADLSAAAVKHGTQIEALVEIDCGAGRCGVTTTQEVVNIAKMIDA
CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
AEGLKFAGIQAYQGAMQHLDSYDERASKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGS
HCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
YYFESNSGAFNELQCGSYAFMDADYGRILDKDGKRIDDGEWENALFILTSVMSHAKADKA
EEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IVDAGLKAQSVDSGLPTIYGRDDVEYVKCSDEHGVVMDPDGVLNVNDKLRLVPGHCDPTC
HHHCCCCHHCCCCCCCEEECCCCCEEEEECCCCCEEECCCCEEECCCCEEEECCCCCCCC
NVHDWYVGVRGGKVETLWPVSARGKAY
CCEEEEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]