| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055039
Identifier: 89055039
GI number: 89055039
Start: 2551559
End: 2551807
Strand: Direct
Name: 89055039
Synonym: Jann_2548
Alternate gene names: NA
Gene position: 2551559-2551807 (Clockwise)
Preceding gene: 89055038
Following gene: 89055041
Centisome position: 59.09
GC content: 61.45
Gene sequence:
>249_bases ATGGATGATCTGTTTTCCCTCGCCGCACCCGTGCCCGCTACTATCGAGGCCGAACGCTGGATTGAACACCTGTTCTCAGC CCGGGCGGCGATCAACGGCCATGTCGTCCGCCGCAAGGCCCGTGATGTGGAACGGATCGTCGGCTGGCCCCGTTTTCGTC AGGAATTACGGCGCCGTGGCTATTCTGCCGTGCGCAATGGCGCCCAGGTCGTCGTCTTTTGCAACGCTCTTCCGGTGCAC AAACTCTGA
Upstream 100 bases:
>100_bases GCGGCGGCGGCCCGACCCGCGAACGTCGCGGCCGCAGACGCGTCCGCAATTGATCCGTTTGTTTACGTGCCTTTAACCAA TCTCTGGTGCTCTGCATGGT
Downstream 100 bases:
>100_bases CGCCGGGGCCCAGACTTTTGCAAAAGTCTGGGCAAAGCCTTGCAAGGCTTTGCAGCACGCCCTTGCAAGGGCGTGGAGAG AGTTTTGCAAAACTCTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDDLFSLAAPVPATIEAERWIEHLFSARAAINGHVVRRKARDVERIVGWPRFRQELRRRGYSAVRNGAQVVVFCNALPVH KL
Sequences:
>Translated_82_residues MDDLFSLAAPVPATIEAERWIEHLFSARAAINGHVVRRKARDVERIVGWPRFRQELRRRGYSAVRNGAQVVVFCNALPVH KL >Mature_82_residues MDDLFSLAAPVPATIEAERWIEHLFSARAAINGHVVRRKARDVERIVGWPRFRQELRRRGYSAVRNGAQVVVFCNALPVH KL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9392; Mature: 9392
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLFSLAAPVPATIEAERWIEHLFSARAAINGHVVRRKARDVERIVGWPRFRQELRRRG CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC YSAVRNGAQVVVFCNALPVHKL HHHHCCCCEEEEEECCCCCCCC >Mature Secondary Structure MDDLFSLAAPVPATIEAERWIEHLFSARAAINGHVVRRKARDVERIVGWPRFRQELRRRG CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC YSAVRNGAQVVVFCNALPVHKL HHHHCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA