Click here to switch to the map view.

The map label for this gene is 89055005

Identifier: 89055005

GI number: 89055005

Start: 2513011

End: 2513391

Strand: Reverse

Name: 89055005

Synonym: Jann_2514

Alternate gene names: NA

Gene position: 2513391-2513011 (Counterclockwise)

Preceding gene: 89055006

Following gene: 89055004

Centisome position: 58.21

GC content: 59.32

Gene sequence:

>381_bases
ATGCAAGACCCGAACGCCCCGCGCCCCCCAATTAATGCGCCCGGCCATGGCCATCCGCTGCAACCCGCCATCATCATCTA
CGCACTTTTTGCGGCGGGTCTGTTCGTGCCATTCGCGGCGCTGGCCGGGTTGGTCTATGCCTATGTCGAACGGGGCAAAG
ACCCGGTTCTCGACAGTCATCTCACCTTTCAGATCAGCACGTTTTGGTGGGGCCTGTTGATGGGCGTGGTGGGCTTCATC
CTTATGTTCGTGCTCGTGGGCTTCCTGGTCTGGGCGTTTTGGGTTGTTTGGCTGATTGTTCGGTTGATCACCGGCTTTCA
ACTGACCCAGGCGAACCGGCCCGTCAGCGGGACTGAGGCGTTTGGACTGAAAGCGGTTTAG

Upstream 100 bases:

>100_bases
TGCGCCCGAACGCGCAAAACGGCGCTTCGCAAAACCTGACGTTGACCTCGCATCTTGCCTGACGTCAAACTGGCCCAACC
CCTTTTGACCGGAGCCCGCC

Downstream 100 bases:

>100_bases
GTGCACTTTTGCACATAAAGTAGCTGTGCGGCGCAGATTGGCGCAAATGTGCAGATCGGCTATCAGTGTCGCACACCCGC
CGAAAGGACCTACGCCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQDPNAPRPPINAPGHGHPLQPAIIIYALFAAGLFVPFAALAGLVYAYVERGKDPVLDSHLTFQISTFWWGLLMGVVGFI
LMFVLVGFLVWAFWVVWLIVRLITGFQLTQANRPVSGTEAFGLKAV

Sequences:

>Translated_126_residues
MQDPNAPRPPINAPGHGHPLQPAIIIYALFAAGLFVPFAALAGLVYAYVERGKDPVLDSHLTFQISTFWWGLLMGVVGFI
LMFVLVGFLVWAFWVVWLIVRLITGFQLTQANRPVSGTEAFGLKAV
>Mature_126_residues
MQDPNAPRPPINAPGHGHPLQPAIIIYALFAAGLFVPFAALAGLVYAYVERGKDPVLDSHLTFQISTFWWGLLMGVVGFI
LMFVLVGFLVWAFWVVWLIVRLITGFQLTQANRPVSGTEAFGLKAV

Specific function: Unknown

COG id: COG3671

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13852; Mature: 13852

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPNAPRPPINAPGHGHPLQPAIIIYALFAAGLFVPFAALAGLVYAYVERGKDPVLDSH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
LTFQISTFWWGLLMGVVGFILMFVLVGFLVWAFWVVWLIVRLITGFQLTQANRPVSGTEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
FGLKAV
CCCCCC
>Mature Secondary Structure
MQDPNAPRPPINAPGHGHPLQPAIIIYALFAAGLFVPFAALAGLVYAYVERGKDPVLDSH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
LTFQISTFWWGLLMGVVGFILMFVLVGFLVWAFWVVWLIVRLITGFQLTQANRPVSGTEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
FGLKAV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA