| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054987
Identifier: 89054987
GI number: 89054987
Start: 2495683
End: 2495913
Strand: Direct
Name: 89054987
Synonym: Jann_2496
Alternate gene names: NA
Gene position: 2495683-2495913 (Clockwise)
Preceding gene: 89054986
Following gene: 89054988
Centisome position: 57.8
GC content: 58.87
Gene sequence:
>231_bases ATGTCTGAATTAGACATGTTCCTCGCGGTGGCCTTCACCATCATGTTGGTGATGATCGCCATCATGCTTGTGATCGGCAT CCCACGGGGAAAGCGGCTGCAAAAGACGAACGAGACGATAGCCGCCAATCAGGCCCGCATGATCGAGATGCAGGAACGTC AACTGGCCGTCGCCGAGCGCCAGGCCACAGCACAAGAGCGGATCGCCACGGCGCTAGAACGCCGCCCATGA
Upstream 100 bases:
>100_bases AATGAGCTGATGGAGGCGCAGATCTCTGTCCAGATGGAGATGCTGGCCGAGATGCGGCGGCAATCGGATGCGTTGGAGAC ATCCGTACAGGACAAGCGCG
Downstream 100 bases:
>100_bases GCGACGCGCTCGCCCTGGTGGGTCGCCTGCTTCTGGCGTCTCTCATGCTGGCTGGCACGTTGCAGAAAATCGCTGACCCC GCGGGTGCGGGCGCGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSELDMFLAVAFTIMLVMIAIMLVIGIPRGKRLQKTNETIAANQARMIEMQERQLAVAERQATAQERIATALERRP
Sequences:
>Translated_76_residues MSELDMFLAVAFTIMLVMIAIMLVIGIPRGKRLQKTNETIAANQARMIEMQERQLAVAERQATAQERIATALERRP >Mature_75_residues SELDMFLAVAFTIMLVMIAIMLVIGIPRGKRLQKTNETIAANQARMIEMQERQLAVAERQATAQERIATALERRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8600; Mature: 8469
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.2 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELDMFLAVAFTIMLVMIAIMLVIGIPRGKRLQKTNETIAANQARMIEMQERQLAVAER CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QATAQERIATALERRP HHHHHHHHHHHHHCCC >Mature Secondary Structure SELDMFLAVAFTIMLVMIAIMLVIGIPRGKRLQKTNETIAANQARMIEMQERQLAVAER CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QATAQERIATALERRP HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA