| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is fabI1 [H]
Identifier: 89054967
GI number: 89054967
Start: 2473394
End: 2474206
Strand: Direct
Name: fabI1 [H]
Synonym: Jann_2476
Alternate gene names: 89054967
Gene position: 2473394-2474206 (Clockwise)
Preceding gene: 89054958
Following gene: 89054968
Centisome position: 57.28
GC content: 60.27
Gene sequence:
>813_bases ATGATGGGTATGATGGATGGCAAGCGCGGACTGATCATGGGCCTCGCCAACGATAAGTCCATCGCCTGGGGCATCGCGAA AGCGGTCGCGGCCGAGGGCGCGGAGCTGGCCTTTTCATATCAGGGCGACGCCCTTCTCAAGCGCGTGGGGCCGTTGGCAA AGCAGGTGGGCTCTGACCTGGTCATCCCCTGCGATGTCGGGGATGAGGCCTCCCTCGATGCGCTGTTCGAGACGCTGGAG GCGGAATGGGGCAACATTGACTTCGTCGTCCACGCCATTGGATTCTCGGACAAAAATGAACTTCGCGGCCGCTATGTGGA GACCTCGCCCGCGAATTTTGAGATGACGATGAACATCTCCGTCTATTCCTTCACCGCCGTGTGCCAGCGGGCGGAAAAGA TGATGAACAATGGCGGCTCGCTCCTCACGCTGACCTATTACGGGTCCGAGAAGGTCATGCCCCATTACAACGTCATGGGC GTGGCCAAGGCAGCCCTTGAGGCGTCGGTGATGTATCTGGCCGAAGATCTGGGCCGCGACGGTATCCGGGTGAACGCGAT CAGCGCGGGCACGATCAAGACGCTGGCCGCCAGCGGCATCGGCGATTTCCGCTACATCCTGAAGTGGAATGAGAACAACT CACCACTGCGGCGCACCGTCACCCAGGATGAGGTCGGCAAATCCGCGCTCTACCTGCTGTCCGATCTGGGCAGCGCCGTG ACGGGAGAGGTGCACCATGTGGATGCGGGCTACCACGTCATCGGCATGAAAAACCCCGAGGCCCCGGATATGTCTTTGGA AAAGAAGGACTAA
Upstream 100 bases:
>100_bases AGCGGGCCACACCGGGCACGGCAAGGGCTGGCTTAATCTTGAAGCCCTGCGGGGGATGGCCTACGAGAGAGGCAACAACA CACCAGGTAAGTGGGACGAT
Downstream 100 bases:
>100_bases GCCATGACCACGCAACTCCCCCACGAAAAAGGCTTTCATATCTCCTGGGATCAGATCCACCGTGACAGCCGCGCCTTGGC GTGGCGGCTGGACAATCACG
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMGMMDGKRGLIMGLANDKSIAWGIAKAVAAEGAELAFSYQGDALLKRVGPLAKQVGSDLVIPCDVGDEASLDALFETLE AEWGNIDFVVHAIGFSDKNELRGRYVETSPANFEMTMNISVYSFTAVCQRAEKMMNNGGSLLTLTYYGSEKVMPHYNVMG VAKAALEASVMYLAEDLGRDGIRVNAISAGTIKTLAASGIGDFRYILKWNENNSPLRRTVTQDEVGKSALYLLSDLGSAV TGEVHHVDAGYHVIGMKNPEAPDMSLEKKD
Sequences:
>Translated_270_residues MMGMMDGKRGLIMGLANDKSIAWGIAKAVAAEGAELAFSYQGDALLKRVGPLAKQVGSDLVIPCDVGDEASLDALFETLE AEWGNIDFVVHAIGFSDKNELRGRYVETSPANFEMTMNISVYSFTAVCQRAEKMMNNGGSLLTLTYYGSEKVMPHYNVMG VAKAALEASVMYLAEDLGRDGIRVNAISAGTIKTLAASGIGDFRYILKWNENNSPLRRTVTQDEVGKSALYLLSDLGSAV TGEVHHVDAGYHVIGMKNPEAPDMSLEKKD >Mature_270_residues MMGMMDGKRGLIMGLANDKSIAWGIAKAVAAEGAELAFSYQGDALLKRVGPLAKQVGSDLVIPCDVGDEASLDALFETLE AEWGNIDFVVHAIGFSDKNELRGRYVETSPANFEMTMNISVYSFTAVCQRAEKMMNNGGSLLTLTYYGSEKVMPHYNVMG VAKAALEASVMYLAEDLGRDGIRVNAISAGTIKTLAASGIGDFRYILKWNENNSPLRRTVTQDEVGKSALYLLSDLGSAV TGEVHHVDAGYHVIGMKNPEAPDMSLEKKD
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=260, Percent_Identity=50.3846153846154, Blast_Score=261, Evalue=5e-71, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=26.5625, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=28.1124497991968, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=27.5193798449612, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=25.9842519685039, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29143; Mature: 29143
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGMMDGKRGLIMGLANDKSIAWGIAKAVAAEGAELAFSYQGDALLKRVGPLAKQVGSDL CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCE VIPCDVGDEASLDALFETLEAEWGNIDFVVHAIGFSDKNELRGRYVETSPANFEMTMNIS EEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCEEEECCCCCEEEEEEEE VYSFTAVCQRAEKMMNNGGSLLTLTYYGSEKVMPHYNVMGVAKAALEASVMYLAEDLGRD EHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC GIRVNAISAGTIKTLAASGIGDFRYILKWNENNSPLRRTVTQDEVGKSALYLLSDLGSAV CEEEEEEECCHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHCHHHHHHHHHCCHHH TGEVHHVDAGYHVIGMKNPEAPDMSLEKKD CCCEEEECCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MMGMMDGKRGLIMGLANDKSIAWGIAKAVAAEGAELAFSYQGDALLKRVGPLAKQVGSDL CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCE VIPCDVGDEASLDALFETLEAEWGNIDFVVHAIGFSDKNELRGRYVETSPANFEMTMNIS EEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCEEEECCCCCEEEEEEEE VYSFTAVCQRAEKMMNNGGSLLTLTYYGSEKVMPHYNVMGVAKAALEASVMYLAEDLGRD EHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC GIRVNAISAGTIKTLAASGIGDFRYILKWNENNSPLRRTVTQDEVGKSALYLLSDLGSAV CEEEEEEECCHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHCHHHHHHHHHCCHHH TGEVHHVDAGYHVIGMKNPEAPDMSLEKKD CCCEEEECCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]