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The map label for this gene is yicC [C]

Identifier: 89054932

GI number: 89054932

Start: 2432785

End: 2433669

Strand: Reverse

Name: yicC [C]

Synonym: Jann_2441

Alternate gene names: 89054932

Gene position: 2433669-2432785 (Counterclockwise)

Preceding gene: 89054934

Following gene: 89054931

Centisome position: 56.36

GC content: 65.42

Gene sequence:

>885_bases
ATGGGTGACGCGGCCCTATCGTCGATGACCGCCTTCGCCAGCGCGGAGGGCGCGGCCGGGGATTTGTCGTGGAGCTGGGA
TCTGCGGTCTGTGAATGGTCGCGGTCTGGACCTGCGCCTGCGTTTGCCTGAGGGGCTGTCGGCCCTAGAACAGCCCGTGC
GCAAGGCACTTCAGACGGCTTTGACGCGCGGGAATGTGACGCTTGGCTTGCGTGTGACGCGGGCGGTCACAGCCTCGGGC
CGTCTGTCGCCTGAGGCGCTGGACGCCGCCCTTGCGCTGATCGAGGAGGTGGAGGCAAAGGCCAACGGTGCCCTGACACA
CTCGACCGCCGTGGACGTTTTGGGGATGCGTGGCGTGATGGACAGCACGGACGCGACCGCCTTGCCCAAGGTCGAAACCC
TAATGGCGGAGGTTGATACCCTGATCACCGCCTTTGTCGACATGCGCCAGACGGAGGGGGCGGCTTTGGCGCAGGTCATG
TCCGGCCAGCTGACCCGGATCGCGGAATTGACAAATGCCGCGATGCAGGCGGCCACTGCCCGGACGGAGGCGCAAGGCGC
GCGTCTGCGCACGCAAGTCGCGGCCCTGCTGGAGGCCACAGACGTGGTGGACGAGGAGCGGCTGGCCCAGGAATTGGCGC
TTCTGGCGGTGAAAGGCGACGTGACGGAAGAGATCGACCGCCTGCGCGCCCATGTCAGTGCGGCGCGCGATTTGATCGCT
GGCGGCGGGCCGGTTGGACGCAAGCTGGACTTCCTTATGCAGGAGTTTAACCGCGAGGCCAACACGCTCTGCGCCAAATC
GTCCGACACCGCGCTGACGGCCATTGGCCTTGACCTGAAACTGACCATAGATCAGATGCGCGAGCAGGTGCAAAATGTGG
AATGA

Upstream 100 bases:

>100_bases
TTATCCCGGGCTGCCATTCCTGTGGGTTTATGAATACACTGTTTAAAATTGTTCGGGCAGGGGGAGATTTGGCAGATGGT
TAACAGCAGGCAGCACCGAC

Downstream 100 bases:

>100_bases
CGATGTCTGATTTGAGACGGCGTGGCCTTCTGATTATCCTGTCCTCACCATCGGGTGCGGGCAAATCGACCCTCGCGCGG
CGCTTGATGGCCTGGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MGDAALSSMTAFASAEGAAGDLSWSWDLRSVNGRGLDLRLRLPEGLSALEQPVRKALQTALTRGNVTLGLRVTRAVTASG
RLSPEALDAALALIEEVEAKANGALTHSTAVDVLGMRGVMDSTDATALPKVETLMAEVDTLITAFVDMRQTEGAALAQVM
SGQLTRIAELTNAAMQAATARTEAQGARLRTQVAALLEATDVVDEERLAQELALLAVKGDVTEEIDRLRAHVSAARDLIA
GGGPVGRKLDFLMQEFNREANTLCAKSSDTALTAIGLDLKLTIDQMREQVQNVE

Sequences:

>Translated_294_residues
MGDAALSSMTAFASAEGAAGDLSWSWDLRSVNGRGLDLRLRLPEGLSALEQPVRKALQTALTRGNVTLGLRVTRAVTASG
RLSPEALDAALALIEEVEAKANGALTHSTAVDVLGMRGVMDSTDATALPKVETLMAEVDTLITAFVDMRQTEGAALAQVM
SGQLTRIAELTNAAMQAATARTEAQGARLRTQVAALLEATDVVDEERLAQELALLAVKGDVTEEIDRLRAHVSAARDLIA
GGGPVGRKLDFLMQEFNREANTLCAKSSDTALTAIGLDLKLTIDQMREQVQNVE
>Mature_293_residues
GDAALSSMTAFASAEGAAGDLSWSWDLRSVNGRGLDLRLRLPEGLSALEQPVRKALQTALTRGNVTLGLRVTRAVTASGR
LSPEALDAALALIEEVEAKANGALTHSTAVDVLGMRGVMDSTDATALPKVETLMAEVDTLITAFVDMRQTEGAALAQVMS
GQLTRIAELTNAAMQAATARTEAQGARLRTQVAALLEATDVVDEERLAQELALLAVKGDVTEEIDRLRAHVSAARDLIAG
GGPVGRKLDFLMQEFNREANTLCAKSSDTALTAIGLDLKLTIDQMREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=295, Percent_Identity=37.9661016949153, Blast_Score=161, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31107; Mature: 30976

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDAALSSMTAFASAEGAAGDLSWSWDLRSVNGRGLDLRLRLPEGLSALEQPVRKALQTA
CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LTRGNVTLGLRVTRAVTASGRLSPEALDAALALIEEVEAKANGALTHSTAVDVLGMRGVM
HHCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCC
DSTDATALPKVETLMAEVDTLITAFVDMRQTEGAALAQVMSGQLTRIAELTNAAMQAATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEAQGARLRTQVAALLEATDVVDEERLAQELALLAVKGDVTEEIDRLRAHVSAARDLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GGGPVGRKLDFLMQEFNREANTLCAKSSDTALTAIGLDLKLTIDQMREQVQNVE
CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCEEEEEHHHHHHHHHCCC
>Mature Secondary Structure 
GDAALSSMTAFASAEGAAGDLSWSWDLRSVNGRGLDLRLRLPEGLSALEQPVRKALQTA
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LTRGNVTLGLRVTRAVTASGRLSPEALDAALALIEEVEAKANGALTHSTAVDVLGMRGVM
HHCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCC
DSTDATALPKVETLMAEVDTLITAFVDMRQTEGAALAQVMSGQLTRIAELTNAAMQAATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTEAQGARLRTQVAALLEATDVVDEERLAQELALLAVKGDVTEEIDRLRAHVSAARDLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GGGPVGRKLDFLMQEFNREANTLCAKSSDTALTAIGLDLKLTIDQMREQVQNVE
CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]