| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054903
Identifier: 89054903
GI number: 89054903
Start: 2412869
End: 2413309
Strand: Direct
Name: 89054903
Synonym: Jann_2412
Alternate gene names: NA
Gene position: 2412869-2413309 (Clockwise)
Preceding gene: 89054902
Following gene: 89054904
Centisome position: 55.88
GC content: 59.41
Gene sequence:
>441_bases TTGGGTCCGTGCCGCCTGCCGCGCCGCGCGATCACGAAAAAGTTAGGGAAATACCTAAGTCTCCTTGACGGCACGACCCC GATGGCATTACTTAGGGATATGTCTAAGTATGATCAGAGCCTCGACCTGTGCTTTTCCGCGCTCGGCGATCCGACACGCC GCCTGATCCTGCAACGCCTTGCGCAGGGTGATGCGAGTGTCAGTGAACTGGCGGAACCGCACGACATGGCACTGCCGTCT TTCATGGAACACTTGAAGAAGCTGGAAGCGGCGGGCCTCGTCACGTCACGGAAGCAAGGCCGGACGCGAACCTGCGCGCT TGCCCCCGATGCTTTTGCGCCCGCCAAAGACTGGCTGCGCGAGCAAAGCGAAATCTGGGATGCGCGGCTCGACCGCCTGG ATGATTACGTCACCAGTCTGATGAAGGAACGCAACAAATGA
Upstream 100 bases:
>100_bases TCCGGTCGCCGGATGTCAGCTTCGCCCTGCATGACCCACCTTGGGGAACACCGTGATGCCCTTGTGGAACTGCGCCGATG ATGCGTGACGGAGCAAGACA
Downstream 100 bases:
>100_bases AACTCGATCCAGAAACCGATCTGACCTTCACCCGCACCCTCCAAGCGCCGCGTGCCTTGCTGTGGGAGTGTTGGACGACG CCTGACCACATCAAGCATTT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Arsr Family Transcriptional Regulator; Arsenical Resistance Operon Repressor; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator Arsr Domain Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGPCRLPRRAITKKLGKYLSLLDGTTPMALLRDMSKYDQSLDLCFSALGDPTRRLILQRLAQGDASVSELAEPHDMALPS FMEHLKKLEAAGLVTSRKQGRTRTCALAPDAFAPAKDWLREQSEIWDARLDRLDDYVTSLMKERNK
Sequences:
>Translated_146_residues MGPCRLPRRAITKKLGKYLSLLDGTTPMALLRDMSKYDQSLDLCFSALGDPTRRLILQRLAQGDASVSELAEPHDMALPS FMEHLKKLEAAGLVTSRKQGRTRTCALAPDAFAPAKDWLREQSEIWDARLDRLDDYVTSLMKERNK >Mature_145_residues GPCRLPRRAITKKLGKYLSLLDGTTPMALLRDMSKYDQSLDLCFSALGDPTRRLILQRLAQGDASVSELAEPHDMALPSF MEHLKKLEAAGLVTSRKQGRTRTCALAPDAFAPAKDWLREQSEIWDARLDRLDDYVTSLMKERNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16477; Mature: 16346
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPCRLPRRAITKKLGKYLSLLDGTTPMALLRDMSKYDQSLDLCFSALGDPTRRLILQRL CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AQGDASVSELAEPHDMALPSFMEHLKKLEAAGLVTSRKQGRTRTCALAPDAFAPAKDWLR HCCCCCHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHH EQSEIWDARLDRLDDYVTSLMKERNK HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GPCRLPRRAITKKLGKYLSLLDGTTPMALLRDMSKYDQSLDLCFSALGDPTRRLILQRL CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AQGDASVSELAEPHDMALPSFMEHLKKLEAAGLVTSRKQGRTRTCALAPDAFAPAKDWLR HCCCCCHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHH EQSEIWDARLDRLDDYVTSLMKERNK HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA