Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054872

Identifier: 89054872

GI number: 89054872

Start: 2384876

End: 2385340

Strand: Direct

Name: 89054872

Synonym: Jann_2381

Alternate gene names: NA

Gene position: 2384876-2385340 (Clockwise)

Preceding gene: 89054871

Following gene: 89054876

Centisome position: 55.23

GC content: 66.67

Gene sequence:

>465_bases
ATGAAACGCATGATTTTGGCCGCGCTGGCGGTTCTGGTTGCAGCCCCGATGGCCGAGGCCCAGGAGTATAGCGCGGAGGC
GGTGGCGGCCGCGGTCCTGACAGGATACCGGACCCAGGACGCGACGCTGATCGCGCCCCATTCCAACGCAACCAACGCGG
AGTTCTTCGCCAATATGATGAACGGCGGCGAGCATCCGAACCAATTGTGGGGCGGCACGCGCGGTGCGGCGGGCGTGGGT
TGGGACGGAATGATCCTGCCCGCCCGCATCAATGGACGGGGCGATGCGGTGGTGCCCTTTGCCATCGAGGGAGCGGCGGG
TCCCGCAGCGCTCGGGTCCGGAGTGGCGGGGCGCTACATGGCGATTGTCCTGACGCTGGACGGGGCGCAGGACACGAGCT
GGGGCTTTGAGGATATCAACTATATCGACCGCACCGCCTATGGGGCGATGGCAGAGGGGCGCTAG

Upstream 100 bases:

>100_bases
CGCGCCGGCAACGGGATGCAGGCCGTGTCAGGCTCTCCCTACCTTGGCTGAGGGCGGGCGATGATCTTAGGGTAGCGTTC
GGACAATCAAAGGACTTTAC

Downstream 100 bases:

>100_bases
GTCCATCGGGTCAGCTCCATCGCGTCAGTCCCATTCCGGGACCTCATCGGGCATGAACGGAAGATCCGTGTCGGTGGTCT
TCACGCCCAGTTGCGTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKRMILAALAVLVAAPMAEAQEYSAEAVAAAVLTGYRTQDATLIAPHSNATNAEFFANMMNGGEHPNQLWGGTRGAAGVG
WDGMILPARINGRGDAVVPFAIEGAAGPAALGSGVAGRYMAIVLTLDGAQDTSWGFEDINYIDRTAYGAMAEGR

Sequences:

>Translated_154_residues
MKRMILAALAVLVAAPMAEAQEYSAEAVAAAVLTGYRTQDATLIAPHSNATNAEFFANMMNGGEHPNQLWGGTRGAAGVG
WDGMILPARINGRGDAVVPFAIEGAAGPAALGSGVAGRYMAIVLTLDGAQDTSWGFEDINYIDRTAYGAMAEGR
>Mature_154_residues
MKRMILAALAVLVAAPMAEAQEYSAEAVAAAVLTGYRTQDATLIAPHSNATNAEFFANMMNGGEHPNQLWGGTRGAAGVG
WDGMILPARINGRGDAVVPFAIEGAAGPAALGSGVAGRYMAIVLTLDGAQDTSWGFEDINYIDRTAYGAMAEGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15917; Mature: 15917

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMILAALAVLVAAPMAEAQEYSAEAVAAAVLTGYRTQDATLIAPHSNATNAEFFANMM
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH
NGGEHPNQLWGGTRGAAGVGWDGMILPARINGRGDAVVPFAIEGAAGPAALGSGVAGRYM
CCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCHHHCCCCCCCEE
AIVLTLDGAQDTSWGFEDINYIDRTAYGAMAEGR
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRMILAALAVLVAAPMAEAQEYSAEAVAAAVLTGYRTQDATLIAPHSNATNAEFFANMM
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH
NGGEHPNQLWGGTRGAAGVGWDGMILPARINGRGDAVVPFAIEGAAGPAALGSGVAGRYM
CCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCHHHCCCCCCCEE
AIVLTLDGAQDTSWGFEDINYIDRTAYGAMAEGR
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA