Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054858

Identifier: 89054858

GI number: 89054858

Start: 2372160

End: 2372813

Strand: Direct

Name: 89054858

Synonym: Jann_2367

Alternate gene names: NA

Gene position: 2372160-2372813 (Clockwise)

Preceding gene: 89054845

Following gene: 89054859

Centisome position: 54.94

GC content: 59.79

Gene sequence:

>654_bases
ATGCCCGAGGTTATTTTCCCCGGACCAGAAGGCCGCTTGGAAGGCCGCTACCACCCCCAAAAGGCCAAAGACGCCCCCAT
CGCGATCATCCTTCATCCGCATCCCCAATTCGGCGGCACGATGAACAACCGTGTCGTCTACAATCTGCACTACGCCTATC
ATCAGATGGGGTTCACGGTGCTGCGCTTCAATTTCCGGGGCGTGGGCCGGTCGCAGGGCGAATATGATCAGGGCATCGGC
GAGCTTTCTGACGCGGCGTCCGCCCTCGATTACCTTCAGTCCATGAACCCCAACTCCAAGCATTGTTGGGTTGCGGGCTT
CTCATTTGGGGCGTGGATCGGCATGCAACTTCTGATGCGGCGGCCCGAGATAACCGGCTTTATCTCCGTATCGCCGCCCG
CGAACATGTATGATTTCTCGTTCCTCGCGCCCTGCCCGGCCTCGGGCCTGATCATCAACGGCACCTCGGATCGCGTGGCC
AAACCACAGGACACCCGCATTCTCGTCGACAAGCTGCACGAGCAGAAAGGCATCACCATCACCCACGAAGAGATGGAGGG
GGCGGGCCACTTCTTCGAAGACCCCCATATGGATCCGATGATCGAGAGCGTCCAAAGCTACGTGCGCCGCCGGTTGACCG
AGACGACACGGTAA

Upstream 100 bases:

>100_bases
TCGTTCTAGGGTGAGGCGTGCGGGTCGTCAACAATCCGCACTCGCCCAGGGACCAAAGCAACTTGCGCACGCAGCGCGTG
TACCGCGATAGGAGACGGGA

Downstream 100 bases:

>100_bases
CCGCGATGGGACTTGCCAACGATCTTGCCGAACAGCTTGCCATCGACGCGTGTGAAGCCGCGATAGCTTTAGATGACGAC
AGTCTGCCCGAGACCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPEVIFPGPEGRLEGRYHPQKAKDAPIAIILHPHPQFGGTMNNRVVYNLHYAYHQMGFTVLRFNFRGVGRSQGEYDQGIG
ELSDAASALDYLQSMNPNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPASGLIINGTSDRVA
KPQDTRILVDKLHEQKGITITHEEMEGAGHFFEDPHMDPMIESVQSYVRRRLTETTR

Sequences:

>Translated_217_residues
MPEVIFPGPEGRLEGRYHPQKAKDAPIAIILHPHPQFGGTMNNRVVYNLHYAYHQMGFTVLRFNFRGVGRSQGEYDQGIG
ELSDAASALDYLQSMNPNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPASGLIINGTSDRVA
KPQDTRILVDKLHEQKGITITHEEMEGAGHFFEDPHMDPMIESVQSYVRRRLTETTR
>Mature_216_residues
PEVIFPGPEGRLEGRYHPQKAKDAPIAIILHPHPQFGGTMNNRVVYNLHYAYHQMGFTVLRFNFRGVGRSQGEYDQGIGE
LSDAASALDYLQSMNPNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPASGLIINGTSDRVAK
PQDTRILVDKLHEQKGITITHEEMEGAGHFFEDPHMDPMIESVQSYVRRRLTETTR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 24423; Mature: 24292

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVIFPGPEGRLEGRYHPQKAKDAPIAIILHPHPQFGGTMNNRVVYNLHYAYHQMGFTV
CCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHCEEE
LRFNFRGVGRSQGEYDQGIGELSDAASALDYLQSMNPNSKHCWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHC
RPEITGFISVSPPANMYDFSFLAPCPASGLIINGTSDRVAKPQDTRILVDKLHEQKGITI
CCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEE
THEEMEGAGHFFEDPHMDPMIESVQSYVRRRLTETTR
EHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEVIFPGPEGRLEGRYHPQKAKDAPIAIILHPHPQFGGTMNNRVVYNLHYAYHQMGFTV
CCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHCEEE
LRFNFRGVGRSQGEYDQGIGELSDAASALDYLQSMNPNSKHCWVAGFSFGAWIGMQLLMR
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHC
RPEITGFISVSPPANMYDFSFLAPCPASGLIINGTSDRVAKPQDTRILVDKLHEQKGITI
CCCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEE
THEEMEGAGHFFEDPHMDPMIESVQSYVRRRLTETTR
EHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]