| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is acrR [C]
Identifier: 89054845
GI number: 89054845
Start: 2360251
End: 2360868
Strand: Direct
Name: acrR [C]
Synonym: Jann_2354
Alternate gene names: 89054845
Gene position: 2360251-2360868 (Clockwise)
Preceding gene: 89054844
Following gene: 89054858
Centisome position: 54.66
GC content: 64.72
Gene sequence:
>618_bases ATGCCCAAACGTGGCTACCATCATGGCAACCTGAAACAGGCGCTGGTTGACGCGGCTCTGGGGTTGATCGAGTCCAAGGG TCCCACCGGCTTTACCCTGTCGGAGGCGGCCAAGAATGCAGGCGTCACGCCCGCCGCCGTCTATCGCCACTTTGAGGGGC GCGAAGACCTGATCGCGGAATGCGCGCGGCAGGGCCACGACATTTTCGCCGATCTGATGGAGCACGCCTTCAATGGCGGA GAGCCCTCCGCCCTGGCCGCGTTCGAGGCCACGGGCCGCGCCTATCTGGCCTTTGCGCGCAAGTTCCCGGGCCATTACAT GGCGATGTTCGAGAGCGGTACATCGGCCAATGCCACGCCCGAATTGGCCTTGGCCGCCAACAAATCCCGCGCCGTTCTGG AACATGCCGCCGAGGCCCTGTCGGAACATATCCCGCCCGAAAAACGACCGCCGCCCTCGATGTTCTCATCCCATATCTGG GCCATGTCCCACGGCGTGGTGGAGCTGTTTGCGCGCGGCAGGCCCGGTGCGAACACGCCCTTCCCTCCAGAAGACCTCCT GGAAGCCGGGATTGGCATCTACCTGCGTGGCCTCGGCCTGATCGAGCCCGACGCCTGA
Upstream 100 bases:
>100_bases ATCTGGACTACGCGGGCAAAGACAAAAAGCTGGTTGGCGCGCCCGATCCGGCGATCACGGGCGGCCCGGACATGTGGGTC GACCCGGGCGCGCCCGCCTG
Downstream 100 bases:
>100_bases CCTCTCCCCCTGGGACACCAGTTCACGGCACTCGCCAATCGCAGCACCCGCTCCCCCCTTCATCTTGGCAAATACAACTC AATCCTGACCCAAACGCCTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPKRGYHHGNLKQALVDAALGLIESKGPTGFTLSEAAKNAGVTPAAVYRHFEGREDLIAECARQGHDIFADLMEHAFNGG EPSALAAFEATGRAYLAFARKFPGHYMAMFESGTSANATPELALAANKSRAVLEHAAEALSEHIPPEKRPPPSMFSSHIW AMSHGVVELFARGRPGANTPFPPEDLLEAGIGIYLRGLGLIEPDA
Sequences:
>Translated_205_residues MPKRGYHHGNLKQALVDAALGLIESKGPTGFTLSEAAKNAGVTPAAVYRHFEGREDLIAECARQGHDIFADLMEHAFNGG EPSALAAFEATGRAYLAFARKFPGHYMAMFESGTSANATPELALAANKSRAVLEHAAEALSEHIPPEKRPPPSMFSSHIW AMSHGVVELFARGRPGANTPFPPEDLLEAGIGIYLRGLGLIEPDA >Mature_204_residues PKRGYHHGNLKQALVDAALGLIESKGPTGFTLSEAAKNAGVTPAAVYRHFEGREDLIAECARQGHDIFADLMEHAFNGGE PSALAAFEATGRAYLAFARKFPGHYMAMFESGTSANATPELALAANKSRAVLEHAAEALSEHIPPEKRPPPSMFSSHIWA MSHGVVELFARGRPGANTPFPPEDLLEAGIGIYLRGLGLIEPDA
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21899; Mature: 21768
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRGYHHGNLKQALVDAALGLIESKGPTGFTLSEAAKNAGVTPAAVYRHFEGREDLIAE CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHH CARQGHDIFADLMEHAFNGGEPSALAAFEATGRAYLAFARKFPGHYMAMFESGTSANATP HHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCC ELALAANKSRAVLEHAAEALSEHIPPEKRPPPSMFSSHIWAMSHGVVELFARGRPGANTP CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FPPEDLLEAGIGIYLRGLGLIEPDA CCHHHHHHCCHHHHHHCCCCCCCCC >Mature Secondary Structure PKRGYHHGNLKQALVDAALGLIESKGPTGFTLSEAAKNAGVTPAAVYRHFEGREDLIAE CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHH CARQGHDIFADLMEHAFNGGEPSALAAFEATGRAYLAFARKFPGHYMAMFESGTSANATP HHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCC ELALAANKSRAVLEHAAEALSEHIPPEKRPPPSMFSSHIWAMSHGVVELFARGRPGANTP CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FPPEDLLEAGIGIYLRGLGLIEPDA CCHHHHHHCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA