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The map label for this gene is iscR [H]

Identifier: 89054857

GI number: 89054857

Start: 2371476

End: 2371934

Strand: Reverse

Name: iscR [H]

Synonym: Jann_2366

Alternate gene names: 89054857

Gene position: 2371934-2371476 (Counterclockwise)

Preceding gene: 89054860

Following gene: 89054856

Centisome position: 54.93

GC content: 62.53

Gene sequence:

>459_bases
ATGAAACTGAGCACCAAAGGACGCTACGCAATGGTGGCGATGGCCGATCTGGCGTTGCAGACCGGTGACGTGCTGACGCC
GCTGTCGGATCTGTCCAAACGCCAGAATGTGAGCCTGCCGTATCTGGAGCAGTTGTTCGTGAAGCTGCGCCGGGCCGAAT
TGGTTGTGTCTGTCCGGGGTCCCGGCGGGGGATACAGGCTGGCGCGGCCCGCCACCGAGATCCGGGTTGTGGAGATTTTC
GAGGCGGTCGACGAGACGGTCAGCGCGCTGCATATGGGGGCAGGGGCCACCGGCGGGGGATCGGGCAGCCGCGCGCAGAG
CCTGACCAACCGCTTGTGGGAAGGATTTTCGGCCCATGTCTATGTGTTCCTGCACCAGACGCGATTGTCGGATGTGGTGA
AGAATGAACTGTCGCCGTGTCCGGCGGTGCCGAACCTTTTTGAGCTGGTCGATGAGTAG

Upstream 100 bases:

>100_bases
CGGCAAAGGTTGCATCGCCTTAAGGGCGGGGCGCGGGAAGGTCAATCATTCAAGCGCCCTGGACCACTGGTTTTGGGCGG
ACGTGGCGGGGGCGACATCC

Downstream 100 bases:

>100_bases
AGATTGCGCCGCGCTGACGCGCGTCGCCGATGGCGATTTTTCTACAAAAAAATCGCGGCGCCGGGGTAGCGGTGCGCATA
GGCCGCGCGCGGTGTTACAG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKLSTKGRYAMVAMADLALQTGDVLTPLSDLSKRQNVSLPYLEQLFVKLRRAELVVSVRGPGGGYRLARPATEIRVVEIF
EAVDETVSALHMGAGATGGGSGSRAQSLTNRLWEGFSAHVYVFLHQTRLSDVVKNELSPCPAVPNLFELVDE

Sequences:

>Translated_152_residues
MKLSTKGRYAMVAMADLALQTGDVLTPLSDLSKRQNVSLPYLEQLFVKLRRAELVVSVRGPGGGYRLARPATEIRVVEIF
EAVDETVSALHMGAGATGGGSGSRAQSLTNRLWEGFSAHVYVFLHQTRLSDVVKNELSPCPAVPNLFELVDE
>Mature_152_residues
MKLSTKGRYAMVAMADLALQTGDVLTPLSDLSKRQNVSLPYLEQLFVKLRRAELVVSVRGPGGGYRLARPATEIRVVEIF
EAVDETVSALHMGAGATGGGSGSRAQSLTNRLWEGFSAHVYVFLHQTRLSDVVKNELSPCPAVPNLFELVDE

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=136, Percent_Identity=44.1176470588235, Blast_Score=109, Evalue=7e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16515; Mature: 16515

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTKGRYAMVAMADLALQTGDVLTPLSDLSKRQNVSLPYLEQLFVKLRRAELVVSVRG
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEC
PGGGYRLARPATEIRVVEIFEAVDETVSALHMGAGATGGGSGSRAQSLTNRLWEGFSAHV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEE
YVFLHQTRLSDVVKNELSPCPAVPNLFELVDE
EEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKLSTKGRYAMVAMADLALQTGDVLTPLSDLSKRQNVSLPYLEQLFVKLRRAELVVSVRG
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEC
PGGGYRLARPATEIRVVEIFEAVDETVSALHMGAGATGGGSGSRAQSLTNRLWEGFSAHV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEE
YVFLHQTRLSDVVKNELSPCPAVPNLFELVDE
EEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA