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The map label for this gene is sufB [C]

Identifier: 89054855

GI number: 89054855

Start: 2368678

End: 2370204

Strand: Reverse

Name: sufB [C]

Synonym: Jann_2364

Alternate gene names: 89054855

Gene position: 2370204-2368678 (Counterclockwise)

Preceding gene: 89054856

Following gene: 89054854

Centisome position: 54.89

GC content: 58.02

Gene sequence:

>1527_bases
ATGAGCGCACTCGATACAGATGTTCAGGTGAAAGACGGTGTCGATCAGGAAACGGTGGATGCCGTTAAAGGCCTGGGGGG
CGCGTATAAATACGGCTGGAACACCGAGATCGAGATGGACTATGCGCCGATGGGCGTGAACGAGGACATCGTGCGCCTGA
TCTCGGAGAAGAACGAAGAGCCGGAGTGGATGCTGGACTGGCGTCTGCAAGCGTTCAAGCGCTGGCAAAAGATGAAAGAG
CCGGAATGGGCGATGGTCGATTATCCGGCGATCGACTACCAATCGCAGTATTACTATGCGCGCCCCAAGAGCATGGAAAC
CAAGCCGAAGTCGTTGGATGAGGTCGATCCCAAGCTGTTGGAAACGTACAAGAAACTCGGCATTCCGCTGAAGGAGCAGA
TGATCCTCGCGGGGGTTGAGGGCGCGGAAGACATGCCGGCGGAGGGTCGCAAGGTCGCCGTCGACGCGGTCTTTGACAGT
GTGTCTGTGGGTACGACGTTTCAGGCCGAGCTGAAGAAGGCGGGCGTGATCTTCTGCTCGATCAGTGAAGCGATCAAAGA
GCATCCGGATCTTGTGAAGAAGTACCTCGGCTCGGTCGTTCCGATCACCGATAACTTCTTTGCGACGTTGAATTCGGCCG
TCTTCTCGGATGGGTCCTTCGTCTACATCCCGCCGGGCGTGCGCTGCCCGATGGAGCTTTCGACGTATTTCCGCATCAAC
GCGGAGAATACCGGCCAGTTTGAGCGGACGTTGATCATCGCGGATCGTGAAAGCTACGTGTCCTACCTTGAGGGCTGCAC
AGCGCCGATGCGCGACACGCACCAGTTGCACGCCGCTGTGGTGGAACTGGTGCTGCTGGATGACGCTGAAATCAAATATT
CCACGGTCCAGAACTGGTATCCGGGCGATGAAAACGGCAAGGGCGGTATCTACAATTTTGTGACCAAACGCGCCGATTGC
CGGGGCGACCGGTCCAAGGTGATGTGGACGCAGGTGGAAACCGGCTCGGCCGTGACGTGGAAGTACCCCAGCTGCATCCT
GCGCGGCGACGACAGCCAGGGCGAGTTCTACTCCATCGCGATTGCCAACAACATGCAGCAGGCAGACACCGGCACCAAGA
TGATGCATCTGGGCAAGCGGACGAAATCGCGGATCGTCTCCAAGGGGATCAGTGCGGGCAAGGCCCAGAACACCTATCGT
GGGCTGGTGTCCATGCACCCCAAAGCCAAGGACAGCCGCAATTACACGCAATGCGACAGCCTTCTGATCGGTGACAAATG
CGGGGCCCACACGGTGCCCTACATCGAGGTGAAGAACAATTCCTCCCGCGTTGAACATGAGGCGACGACCTCCAAGGTGG
ACGACGATCAGATGTTCTACTGCCAGTCCCGTGGAATGGACGAGGAAGAGGCCGTCGCCCTGATCGTCAACGGCTTCGCC
AAGGAAGTGTTGCAGGCTCTGCCGATGGAATTCGCCATGGAAGCGCAGCAATTGGTTGCGATCTCACTGGAAGGCTCGGT
GGGGTAG

Upstream 100 bases:

>100_bases
CCGCGTTCTGCGAGGCCTGGCTGAGGGCGCGGGACAAGAAGATGGCGCGCGGTGAGCACGCATAGAAATTTCCGCAAATG
ATTGCGGTTTGGAGGGAACG

Downstream 100 bases:

>100_bases
GCGCGGATGGCGGACCTGACGGATCTGGAGCGCACCCGCCATCTGGTGGACCTCCTGGCGCCTGCGCGGAAGACGCGGAT
TGTCGATATCGGGGCCAACC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSALDTDVQVKDGVDQETVDAVKGLGGAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEEPEWMLDWRLQAFKRWQKMKE
PEWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLLETYKKLGIPLKEQMILAGVEGAEDMPAEGRKVAVDAVFDS
VSVGTTFQAELKKAGVIFCSISEAIKEHPDLVKKYLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRIN
AENTGQFERTLIIADRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADC
RGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMMHLGKRTKSRIVSKGISAGKAQNTYR
GLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFA
KEVLQALPMEFAMEAQQLVAISLEGSVG

Sequences:

>Translated_508_residues
MSALDTDVQVKDGVDQETVDAVKGLGGAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEEPEWMLDWRLQAFKRWQKMKE
PEWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLLETYKKLGIPLKEQMILAGVEGAEDMPAEGRKVAVDAVFDS
VSVGTTFQAELKKAGVIFCSISEAIKEHPDLVKKYLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRIN
AENTGQFERTLIIADRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADC
RGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMMHLGKRTKSRIVSKGISAGKAQNTYR
GLVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFA
KEVLQALPMEFAMEAQQLVAISLEGSVG
>Mature_507_residues
SALDTDVQVKDGVDQETVDAVKGLGGAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEEPEWMLDWRLQAFKRWQKMKEP
EWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLLETYKKLGIPLKEQMILAGVEGAEDMPAEGRKVAVDAVFDSV
SVGTTFQAELKKAGVIFCSISEAIKEHPDLVKKYLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINA
ENTGQFERTLIIADRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWYPGDENGKGGIYNFVTKRADCR
GDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMMHLGKRTKSRIVSKGISAGKAQNTYRG
LVSMHPKAKDSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFAK
EVLQALPMEFAMEAQQLVAISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=509, Percent_Identity=56.385068762279, Blast_Score=622, Evalue=1e-179,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 56782; Mature: 56651

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALDTDVQVKDGVDQETVDAVKGLGGAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEE
CCCCCCCCEECCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHCCCCC
PEWMLDWRLQAFKRWQKMKEPEWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLL
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHCCHHHH
ETYKKLGIPLKEQMILAGVEGAEDMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCS
HHHHHHCCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHCCEEEEE
ISEAIKEHPDLVKKYLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRIN
HHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEE
AENTGQFERTLIIADRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWY
CCCCCCEEEEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCEEEEHHCCCC
PGDENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIA
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEE
IANNMQQADTGTKMMHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDS
EECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHC
LLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFA
EEECCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
KEVLQALPMEFAMEAQQLVAISLEGSVG
HHHHHHCCHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
SALDTDVQVKDGVDQETVDAVKGLGGAYKYGWNTEIEMDYAPMGVNEDIVRLISEKNEE
CCCCCCCEECCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHCCCCC
PEWMLDWRLQAFKRWQKMKEPEWAMVDYPAIDYQSQYYYARPKSMETKPKSLDEVDPKLL
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHCCHHHH
ETYKKLGIPLKEQMILAGVEGAEDMPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCS
HHHHHHCCCHHHHEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHCCEEEEE
ISEAIKEHPDLVKKYLGSVVPITDNFFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRIN
HHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEE
AENTGQFERTLIIADRESYVSYLEGCTAPMRDTHQLHAAVVELVLLDDAEIKYSTVQNWY
CCCCCCEEEEEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCEEEEHHCCCC
PGDENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDSQGEFYSIA
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEE
IANNMQQADTGTKMMHLGKRTKSRIVSKGISAGKAQNTYRGLVSMHPKAKDSRNYTQCDS
EECCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHC
LLIGDKCGAHTVPYIEVKNNSSRVEHEATTSKVDDDQMFYCQSRGMDEEEAVALIVNGFA
EEECCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
KEVLQALPMEFAMEAQQLVAISLEGSVG
HHHHHHCCHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]