Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yejA [C]

Identifier: 89054801

GI number: 89054801

Start: 2313783

End: 2315594

Strand: Reverse

Name: yejA [C]

Synonym: Jann_2310

Alternate gene names: 89054801

Gene position: 2315594-2313783 (Counterclockwise)

Preceding gene: 89054805

Following gene: 89054797

Centisome position: 53.63

GC content: 63.52

Gene sequence:

>1812_bases
ATGCCGACAAATTGTTTCTCAAAAGGGACCCTAGCCGTTGTGCTGAGCCTTGGACTTAGCATGAGCGCCCTGGCTGACCC
ACAACATGGTGTGGCGATGTATGGCGAGCCGGCGCTGGGTCCGGACTTCTCGCACCTTCCCTATGCCAACCCCGATGCCC
CCACAGGCGGGCGGATCGTGACCGGCGAAGTGGGTACATTCGACAGTCTGAACCCGCACATCCGGCAGGGATCCACGCCC
TGGCAGTTGCGATTCCTGACCTACGAATCGCTCCTGGGGCGGTCCTGGGACGAGCCGTTCACGCTCTACGGCCTGTTGGC
CGAATCGGTCGACATTGCCGACGACAATCTGTCGGTCGAATTCGTGCTTCGCGAAGAGGCGCGGTTTTCCGATGGCAGCC
CCGTCACCGTGGAGGATGTCATCTGGTCGTTCGAGACCCTCGGCACCGAAGGCCATCCCCGTTATCTCGGCGCATGGAGC
CGGGTAGAAGGGATCGAGGCCACCGGAGATCGGTCTGTCCGGATCACGCTGGCGGAGGCCGACCGGGAGTTGGCGATGAT
CATGGGTCTGCGCCCGATCCTTCAGGCGGCCCAGTGGGACGGGGCAGAGTTCACCGACTCCGGCCTCGACACCGTTCCGA
TCGCCACCGCCCCCTATACGGTCACGGATTTTGAGGCCGGGCGCTTCGTGCAACTGACCCGCAACCCCGATTACTGGGGG
GCGGATCTGCCATTTCGGCGCGGCACCAACGTTATCGACGAGATCCGGATGGAGTTCTTCGCCGACGGCACCGCCATGCG
CGAGGCGTTTACCAGCGGCATCGTGACCACACAGCGCGAAACCTCCGCCACCGCCTGGGCCAATGATTATGACTTCCCGC
GCGTGCAGGCGGGAGAGGTGGAGCTGGTGGAAGTGCCGCACCAGCGCCCATCGGGCATGACCGGCTATGTGATGAATACC
CGCACACCGCTGTTTTCCGACTGGCGGGTCCGGGAGGCGATGATCCAGGCCTACAATTTCGAGTTCATCAACGCGACGGT
GAACGGCGGCGTCGATCCACGCATCACCTCGCCCTACTCCAACTCACCCCTGTCGATGAACCCCGGCCCGGCCGAGGGCC
GCGTGCTGGAACTGTTGGAGCCCTTCGCGGAAGAGCTGCGCCCCGGCGCGATTGAGGGGTATGCGCTGCCCGTCTCCGAT
GGATCCGAGCGCAACCGCAGCGGCATCCGCACCGCCATCGCCCTGATGCAGGAGGCCGGCTACACCGTTGAAGATGGCGT
GATGACCGGGGAGGCTGGCCCGGTGACGTTCGAGATCCTGCTGCAGACCGGAAGCTCCGAGAACGACGCGATCACCAACA
TCTACACCGAAGCGCTGGAACGGCTGGGGATCGACGTGCAAGTCACCCGCGTGGACAGCGCCCAGTTCCGCGAGCGGCGC
GACGTCTATGATTACGACATGATCTATTATCGCTGGGGTCTGTCCCTGAGCCCCGGCAATGAGCAGCGCAACTATTGGGG
CTGCGAGGCGGGCCTGGTCGATGGCGGGCGCAATCTGCATGGCGGCTGCAACCCGGCGATTGACGCGATGATCGACGAGA
TGCTGAGTGCATCCAGTCAGGACAATTACCGTGCGGCCGTCCGCGCCCTGGACCGGATCCTGATTTCAGACCGCTACGTC
GTGCCGTTTCACCACAACCCGATCAGCCGCATCGCCTATAATTCCGAGCTGAACTTCCCGGATACGATCCCGATCTACGG
CGATTGGGTCGGCTGGCAGCCCGATGTCTGGTGGGTTGAAGCGGCGGAATAA

Upstream 100 bases:

>100_bases
CAATGACTTGGCCGGAGTCCAACCGAAAAGTTTGCGCATGGGCCGAGCGCCCGATAGCCTTGAGCATAACAAAACCGAGC
AGCGAGAGGATCGTTCGCAG

Downstream 100 bases:

>100_bases
TATTGGTCGCAGATGGGGGGGGCGCTGCCCCCTCACGTCTTTTCCCAAAGGAAAAGCCGCTCCCCCCGGAGTTGTAAGGC
CCAGGTGAAAAGGGAGGCGT

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MPTNCFSKGTLAVVLSLGLSMSALADPQHGVAMYGEPALGPDFSHLPYANPDAPTGGRIVTGEVGTFDSLNPHIRQGSTP
WQLRFLTYESLLGRSWDEPFTLYGLLAESVDIADDNLSVEFVLREEARFSDGSPVTVEDVIWSFETLGTEGHPRYLGAWS
RVEGIEATGDRSVRITLAEADRELAMIMGLRPILQAAQWDGAEFTDSGLDTVPIATAPYTVTDFEAGRFVQLTRNPDYWG
ADLPFRRGTNVIDEIRMEFFADGTAMREAFTSGIVTTQRETSATAWANDYDFPRVQAGEVELVEVPHQRPSGMTGYVMNT
RTPLFSDWRVREAMIQAYNFEFINATVNGGVDPRITSPYSNSPLSMNPGPAEGRVLELLEPFAEELRPGAIEGYALPVSD
GSERNRSGIRTAIALMQEAGYTVEDGVMTGEAGPVTFEILLQTGSSENDAITNIYTEALERLGIDVQVTRVDSAQFRERR
DVYDYDMIYYRWGLSLSPGNEQRNYWGCEAGLVDGGRNLHGGCNPAIDAMIDEMLSASSQDNYRAAVRALDRILISDRYV
VPFHHNPISRIAYNSELNFPDTIPIYGDWVGWQPDVWWVEAAE

Sequences:

>Translated_603_residues
MPTNCFSKGTLAVVLSLGLSMSALADPQHGVAMYGEPALGPDFSHLPYANPDAPTGGRIVTGEVGTFDSLNPHIRQGSTP
WQLRFLTYESLLGRSWDEPFTLYGLLAESVDIADDNLSVEFVLREEARFSDGSPVTVEDVIWSFETLGTEGHPRYLGAWS
RVEGIEATGDRSVRITLAEADRELAMIMGLRPILQAAQWDGAEFTDSGLDTVPIATAPYTVTDFEAGRFVQLTRNPDYWG
ADLPFRRGTNVIDEIRMEFFADGTAMREAFTSGIVTTQRETSATAWANDYDFPRVQAGEVELVEVPHQRPSGMTGYVMNT
RTPLFSDWRVREAMIQAYNFEFINATVNGGVDPRITSPYSNSPLSMNPGPAEGRVLELLEPFAEELRPGAIEGYALPVSD
GSERNRSGIRTAIALMQEAGYTVEDGVMTGEAGPVTFEILLQTGSSENDAITNIYTEALERLGIDVQVTRVDSAQFRERR
DVYDYDMIYYRWGLSLSPGNEQRNYWGCEAGLVDGGRNLHGGCNPAIDAMIDEMLSASSQDNYRAAVRALDRILISDRYV
VPFHHNPISRIAYNSELNFPDTIPIYGDWVGWQPDVWWVEAAE
>Mature_602_residues
PTNCFSKGTLAVVLSLGLSMSALADPQHGVAMYGEPALGPDFSHLPYANPDAPTGGRIVTGEVGTFDSLNPHIRQGSTPW
QLRFLTYESLLGRSWDEPFTLYGLLAESVDIADDNLSVEFVLREEARFSDGSPVTVEDVIWSFETLGTEGHPRYLGAWSR
VEGIEATGDRSVRITLAEADRELAMIMGLRPILQAAQWDGAEFTDSGLDTVPIATAPYTVTDFEAGRFVQLTRNPDYWGA
DLPFRRGTNVIDEIRMEFFADGTAMREAFTSGIVTTQRETSATAWANDYDFPRVQAGEVELVEVPHQRPSGMTGYVMNTR
TPLFSDWRVREAMIQAYNFEFINATVNGGVDPRITSPYSNSPLSMNPGPAEGRVLELLEPFAEELRPGAIEGYALPVSDG
SERNRSGIRTAIALMQEAGYTVEDGVMTGEAGPVTFEILLQTGSSENDAITNIYTEALERLGIDVQVTRVDSAQFRERRD
VYDYDMIYYRWGLSLSPGNEQRNYWGCEAGLVDGGRNLHGGCNPAIDAMIDEMLSASSQDNYRAAVRALDRILISDRYVV
PFHHNPISRIAYNSELNFPDTIPIYGDWVGWQPDVWWVEAAE

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=592, Percent_Identity=30.4054054054054, Blast_Score=268, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66779; Mature: 66648

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNCFSKGTLAVVLSLGLSMSALADPQHGVAMYGEPALGPDFSHLPYANPDAPTGGRIV
CCCCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
TGEVGTFDSLNPHIRQGSTPWQLRFLTYESLLGRSWDEPFTLYGLLAESVDIADDNLSVE
ECCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHCEECCCCCEEE
FVLREEARFSDGSPVTVEDVIWSFETLGTEGHPRYLGAWSRVEGIEATGDRSVRITLAEA
EEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCCCCCCEEEEEEECC
DRELAMIMGLRPILQAAQWDGAEFTDSGLDTVPIATAPYTVTDFEAGRFVQLTRNPDYWG
CCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCC
ADLPFRRGTNVIDEIRMEFFADGTAMREAFTSGIVTTQRETSATAWANDYDFPRVQAGEV
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCEECCCCCCCCCCCCCCE
ELVEVPHQRPSGMTGYVMNTRTPLFSDWRVREAMIQAYNFEFINATVNGGVDPRITSPYS
EEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCC
NSPLSMNPGPAEGRVLELLEPFAEELRPGAIEGYALPVSDGSERNRSGIRTAIALMQEAG
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
YTVEDGVMTGEAGPVTFEILLQTGSSENDAITNIYTEALERLGIDVQVTRVDSAQFRERR
CEEECCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHC
DVYDYDMIYYRWGLSLSPGNEQRNYWGCEAGLVDGGRNLHGGCNPAIDAMIDEMLSASSQ
CCCCCEEEEEEECCEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DNYRAAVRALDRILISDRYVVPFHHNPISRIAYNSELNFPDTIPIYGDWVGWQPDVWWVE
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHEEECCCCCCCCCCCCEECCCCCCCCEEEEE
AAE
ECC
>Mature Secondary Structure 
PTNCFSKGTLAVVLSLGLSMSALADPQHGVAMYGEPALGPDFSHLPYANPDAPTGGRIV
CCCCCCCCHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
TGEVGTFDSLNPHIRQGSTPWQLRFLTYESLLGRSWDEPFTLYGLLAESVDIADDNLSVE
ECCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHCEECCCCCEEE
FVLREEARFSDGSPVTVEDVIWSFETLGTEGHPRYLGAWSRVEGIEATGDRSVRITLAEA
EEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCCCCCCEEEEEEECC
DRELAMIMGLRPILQAAQWDGAEFTDSGLDTVPIATAPYTVTDFEAGRFVQLTRNPDYWG
CCHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCC
ADLPFRRGTNVIDEIRMEFFADGTAMREAFTSGIVTTQRETSATAWANDYDFPRVQAGEV
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCEECCCCCCCCCCCCCCE
ELVEVPHQRPSGMTGYVMNTRTPLFSDWRVREAMIQAYNFEFINATVNGGVDPRITSPYS
EEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCC
NSPLSMNPGPAEGRVLELLEPFAEELRPGAIEGYALPVSDGSERNRSGIRTAIALMQEAG
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
YTVEDGVMTGEAGPVTFEILLQTGSSENDAITNIYTEALERLGIDVQVTRVDSAQFRERR
CEEECCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHC
DVYDYDMIYYRWGLSLSPGNEQRNYWGCEAGLVDGGRNLHGGCNPAIDAMIDEMLSASSQ
CCCCCEEEEEEECCEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DNYRAAVRALDRILISDRYVVPFHHNPISRIAYNSELNFPDTIPIYGDWVGWQPDVWWVE
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHEEECCCCCCCCCCCCEECCCCCCCCEEEEE
AAE
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA