| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054761
Identifier: 89054761
GI number: 89054761
Start: 2277002
End: 2277673
Strand: Reverse
Name: 89054761
Synonym: Jann_2270
Alternate gene names: NA
Gene position: 2277673-2277002 (Counterclockwise)
Preceding gene: 89054762
Following gene: 89054760
Centisome position: 52.75
GC content: 62.65
Gene sequence:
>672_bases ATGAGCCCGCGGAGCCTCATTCTTTCGGGTGGCATCCTACATCCCTTTGACCAGACCTCCGACCTGATCGCGCAGCATCT CACATTACTAGGTATCCGGTCCGAGATTCTGCCGGTGCGCGAAGGGCTGGCCCGCCTTGGCCAAACCTCATTCGACCTGC TCGCCGTGAACGCGCTGGCCTTCACCATGACGCAACATGAGAAATACGCCTCCCGACGCGCCACCCACTCCTTCGCAATC TCCAAGGACGAGAAGACCGCGATCCGCAGCCACGTTCAGGCGGGCGGCAAACTGCTTGGTCTGCATACGGCGGCAATTTG CTTCGATGATTGGCCGGAATGGCGCGATCTTTTGGGCGTCGCGTGGAAATGGGGCGTGTCGCACCACCCGCCGCCCTGCC CCGTCCGCGTGGCCGATACGCCGCCCTTTGACACCGTGGACGAACTCTATTGCGACATGTCCGTGCACCCAGATGCCGAG GTTCTGCTGACGGGCACCTGCGACGGCGTGGCCGAGCCGCAGCCCATCCTGATCCGCTTCGGCAATGCGGCCTATCTGGC CCTCGGGCATGACAAGGACGCAGTTCAGGATCCCGGCTACGTGCGGCTTCTGAAACGGGCCACCCGTGCCCTATTTCCCC CGAACAGCGAGGACGCTCATGCAATCGATTGA
Upstream 100 bases:
>100_bases ACCTCGCCAGCGACAAGGCGAGTTACGTGAACGGGCACCACCTCGTGGTCGACGGTGGTGTCTCGGTCAGCTTGCTAACG CAGCTGCCACGGGTCGCAAC
Downstream 100 bases:
>100_bases GGGATATTCGGTCCTGATCACCGGTGGCGGCTCGGGCCTCGGGCGCGGCGTGGCCGAAGATATGGCCGCTCGTGGCGCGA AAGTAACGATCACCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSPRSLILSGGILHPFDQTSDLIAQHLTLLGIRSEILPVREGLARLGQTSFDLLAVNALAFTMTQHEKYASRRATHSFAI SKDEKTAIRSHVQAGGKLLGLHTAAICFDDWPEWRDLLGVAWKWGVSHHPPPCPVRVADTPPFDTVDELYCDMSVHPDAE VLLTGTCDGVAEPQPILIRFGNAAYLALGHDKDAVQDPGYVRLLKRATRALFPPNSEDAHAID
Sequences:
>Translated_223_residues MSPRSLILSGGILHPFDQTSDLIAQHLTLLGIRSEILPVREGLARLGQTSFDLLAVNALAFTMTQHEKYASRRATHSFAI SKDEKTAIRSHVQAGGKLLGLHTAAICFDDWPEWRDLLGVAWKWGVSHHPPPCPVRVADTPPFDTVDELYCDMSVHPDAE VLLTGTCDGVAEPQPILIRFGNAAYLALGHDKDAVQDPGYVRLLKRATRALFPPNSEDAHAID >Mature_222_residues SPRSLILSGGILHPFDQTSDLIAQHLTLLGIRSEILPVREGLARLGQTSFDLLAVNALAFTMTQHEKYASRRATHSFAIS KDEKTAIRSHVQAGGKLLGLHTAAICFDDWPEWRDLLGVAWKWGVSHHPPPCPVRVADTPPFDTVDELYCDMSVHPDAEV LLTGTCDGVAEPQPILIRFGNAAYLALGHDKDAVQDPGYVRLLKRATRALFPPNSEDAHAID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24459; Mature: 24328
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRSLILSGGILHPFDQTSDLIAQHLTLLGIRSEILPVREGLARLGQTSFDLLAVNALA CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FTMTQHEKYASRRATHSFAISKDEKTAIRSHVQAGGKLLGLHTAAICFDDWPEWRDLLGV HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCEEEEHHEEEEEECCCHHHHHHHHH AWKWGVSHHPPPCPVRVADTPPFDTVDELYCDMSVHPDAEVLLTGTCDGVAEPQPILIRF HHHCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEE GNAAYLALGHDKDAVQDPGYVRLLKRATRALFPPNSEDAHAID CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SPRSLILSGGILHPFDQTSDLIAQHLTLLGIRSEILPVREGLARLGQTSFDLLAVNALA CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FTMTQHEKYASRRATHSFAISKDEKTAIRSHVQAGGKLLGLHTAAICFDDWPEWRDLLGV HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCEEEEHHEEEEEECCCHHHHHHHHH AWKWGVSHHPPPCPVRVADTPPFDTVDELYCDMSVHPDAEVLLTGTCDGVAEPQPILIRF HHHCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEE GNAAYLALGHDKDAVQDPGYVRLLKRATRALFPPNSEDAHAID CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA