| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054759
Identifier: 89054759
GI number: 89054759
Start: 2275917
End: 2276243
Strand: Reverse
Name: 89054759
Synonym: Jann_2268
Alternate gene names: NA
Gene position: 2276243-2275917 (Counterclockwise)
Preceding gene: 89054760
Following gene: 89054758
Centisome position: 52.72
GC content: 57.19
Gene sequence:
>327_bases ATGATAATCGAACAACGCACCTATGATTTTCACCCCGGCGCGATTCCGAAGTTCTTCAATATCTATGAGGAAACCGGCGC GCGCGAGTTGCAAATGCGCATCCTTGGCAATCTCGTCGGCTACTACATGACCGAGCTGGGCCCCCTGAACCAGACCGTCC ATCTTTGGGGCTACGCGTCGCTTGATGATCGGGCCGCCCGTCGCACCGCATTGATGCAAGAGGACGTCTGGCGCGGGTTT CTGGGGCAGATCCTGCCGCTGTTACAGAGACAGGAAAGCAAGATCCTGCTGCCTCAGCCCTTCTCCCCAATCCCGGGGAA ACAATGA
Upstream 100 bases:
>100_bases GAAGCCGTAGACCACCTGCTGCGTGCAGAATGGACAACGGGCGCCTCTTTGGTCGTCGACGGCGGCCTCGGTCTAGGCGT CAGCTACAAGTGAGTACCCA
Downstream 100 bases:
>100_bases CACCCCGTTGACAGGGCTCACAGAAATATATCAATTTCGATATTAATGAATTCGCTAAAACAAGTGCGGCGAATGCGGGG TGAACGAACCTCGGACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NIPSNAP Family Containing Protein; NIPSNAP Domain-Containing Protein; Nipsnap Family Containing Protein; Nipsnap; NIPSNAP Superfamily; NipSnap
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MIIEQRTYDFHPGAIPKFFNIYEETGARELQMRILGNLVGYYMTELGPLNQTVHLWGYASLDDRAARRTALMQEDVWRGF LGQILPLLQRQESKILLPQPFSPIPGKQ
Sequences:
>Translated_108_residues MIIEQRTYDFHPGAIPKFFNIYEETGARELQMRILGNLVGYYMTELGPLNQTVHLWGYASLDDRAARRTALMQEDVWRGF LGQILPLLQRQESKILLPQPFSPIPGKQ >Mature_108_residues MIIEQRTYDFHPGAIPKFFNIYEETGARELQMRILGNLVGYYMTELGPLNQTVHLWGYASLDDRAARRTALMQEDVWRGF LGQILPLLQRQESKILLPQPFSPIPGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12506; Mature: 12506
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIEQRTYDFHPGAIPKFFNIYEETGARELQMRILGNLVGYYMTELGPLNQTVHLWGYAS CCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC LDDRAARRTALMQEDVWRGFLGQILPLLQRQESKILLPQPFSPIPGKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MIIEQRTYDFHPGAIPKFFNIYEETGARELQMRILGNLVGYYMTELGPLNQTVHLWGYAS CCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC LDDRAARRTALMQEDVWRGFLGQILPLLQRQESKILLPQPFSPIPGKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA