Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054740

Identifier: 89054740

GI number: 89054740

Start: 2257526

End: 2258467

Strand: Reverse

Name: 89054740

Synonym: Jann_2249

Alternate gene names: NA

Gene position: 2258467-2257526 (Counterclockwise)

Preceding gene: 89054741

Following gene: 89054739

Centisome position: 52.3

GC content: 64.44

Gene sequence:

>942_bases
ATGAACCCGCGTGATATCCTTGTGGCCGTGGCCACCCTGCCCCTGCTTGCGACGGCGGTCGCCGCCCAGGACGTGACCGT
GCAAAGCTGCGGCGGTGCCTTCACCTATACCGAGGCCCCCGCCCGTGCGGTGACGCTGAACCAGCAGGCCACCGAGGTGA
TGCTGGCCCTGGGGCTGGAGGACCACATGGTCGGCACCGCCTATATGGACGACGACATCCTGCCCCAATGGCAGGTGGCC
TATGACAGCGTGCCCATCCTGGCCGAGCGCTATCCGGCGCGCGAGGTCGTGATCACCGCCGACCCTGATTTTCTGTTTGC
AGGTTTCGCCTCCGCCTTTTCCGAAGACAACCTTGGGGCGGAGGCCGAGTGGCATGATCTTGGCATCGGGACCTATCTGG
TCGATGCCTCCTGCGATGTGACCAACCCGCCCGACGTGCCCCCCGGCACCGCGCCCATCCTGACCGATATCCGTGTTATC
GGACAGATCTTCGGTGTGGAGGACCGGGCAGAGGCCCTGATCGCTGAGACCGAGGCCCGCCTTGAAGCGACCGCTGCCAG
CAATGCCGGTGGCGGGCGCACTGCGTTCATCTTCGACAGCGGCGACGAGACCCCGTTTTCCATAGGATGCTGCGGTGGAC
CGGGGGTGCTGGTGGAAACGCTGGGGCTTGAAAACATCGCGGGCGATCTGGAAGGGCGTTGGGTCGACCTCAGCTGGGAG
GTCGTGGTTGAGGAAAACCCCGACGTGATCGTGTTGATCGAGGCCGATTGGTCCAGTGCGGCAGAGAAGCGCGACTATAT
GGAGACTGACCCGGTGCTGTCGCAACTGGACGCGGTGCGCGACGGGCGCTTCGTGATTGTGCCCTTCTCGCAGACCGTGC
TGGGGATGCAATTCGTCGATGGGCTCGACAATCTGACCGCACAGCTCGCGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
CAGCTTCCCGATGCCATGGCCGTGCGGCGCTTTGCCGATGTCGTGCTGCGCCAGAACAGGCCCCTTCCCGAATTTCAGAC
CTTCAAGACAGGATCCCCCT

Downstream 100 bases:

>100_bases
CATGTCCGCGTGCCTGATATGACCCAGCGCCTGCCGGTCCTGACGTCTCTGGCCCTTGCCGGATTGGTGCTGGCCGTTCT
GGCCGGTATCTTCTTCGGAA

Product: periplasmic binding protein

Products: NA

Alternate protein names: Iron Transport Lipoprotein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC Transporter; Iron Compound ABC Transporter

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNPRDILVAVATLPLLATAVAAQDVTVQSCGGAFTYTEAPARAVTLNQQATEVMLALGLEDHMVGTAYMDDDILPQWQVA
YDSVPILAERYPAREVVITADPDFLFAGFASAFSEDNLGAEAEWHDLGIGTYLVDASCDVTNPPDVPPGTAPILTDIRVI
GQIFGVEDRAEALIAETEARLEATAASNAGGGRTAFIFDSGDETPFSIGCCGGPGVLVETLGLENIAGDLEGRWVDLSWE
VVVEENPDVIVLIEADWSSAAEKRDYMETDPVLSQLDAVRDGRFVIVPFSQTVLGMQFVDGLDNLTAQLAALN

Sequences:

>Translated_313_residues
MNPRDILVAVATLPLLATAVAAQDVTVQSCGGAFTYTEAPARAVTLNQQATEVMLALGLEDHMVGTAYMDDDILPQWQVA
YDSVPILAERYPAREVVITADPDFLFAGFASAFSEDNLGAEAEWHDLGIGTYLVDASCDVTNPPDVPPGTAPILTDIRVI
GQIFGVEDRAEALIAETEARLEATAASNAGGGRTAFIFDSGDETPFSIGCCGGPGVLVETLGLENIAGDLEGRWVDLSWE
VVVEENPDVIVLIEADWSSAAEKRDYMETDPVLSQLDAVRDGRFVIVPFSQTVLGMQFVDGLDNLTAQLAALN
>Mature_313_residues
MNPRDILVAVATLPLLATAVAAQDVTVQSCGGAFTYTEAPARAVTLNQQATEVMLALGLEDHMVGTAYMDDDILPQWQVA
YDSVPILAERYPAREVVITADPDFLFAGFASAFSEDNLGAEAEWHDLGIGTYLVDASCDVTNPPDVPPGTAPILTDIRVI
GQIFGVEDRAEALIAETEARLEATAASNAGGGRTAFIFDSGDETPFSIGCCGGPGVLVETLGLENIAGDLEGRWVDLSWE
VVVEENPDVIVLIEADWSSAAEKRDYMETDPVLSQLDAVRDGRFVIVPFSQTVLGMQFVDGLDNLTAQLAALN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33325; Mature: 33325

Theoretical pI: Translated: 3.62; Mature: 3.62

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRDILVAVATLPLLATAVAAQDVTVQSCGGAFTYTEAPARAVTLNQQATEVMLALGLE
CCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCEEEEECHHHHHHHHHCCCC
DHMVGTAYMDDDILPQWQVAYDSVPILAERYPAREVVITADPDFLFAGFASAFSEDNLGA
HHEEEEEECCCCCCCCEEECCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
EAEWHDLGIGTYLVDASCDVTNPPDVPPGTAPILTDIRVIGQIFGVEDRAEALIAETEAR
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEATAASNAGGGRTAFIFDSGDETPFSIGCCGGPGVLVETLGLENIAGDLEGRWVDLSWE
HEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHHCCCCCCEEEEEEEE
VVVEENPDVIVLIEADWSSAAEKRDYMETDPVLSQLDAVRDGRFVIVPFSQTVLGMQFVD
EEEECCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
GLDNLTAQLAALN
HHHHHHHHHEECC
>Mature Secondary Structure
MNPRDILVAVATLPLLATAVAAQDVTVQSCGGAFTYTEAPARAVTLNQQATEVMLALGLE
CCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCEEEEECHHHHHHHHHCCCC
DHMVGTAYMDDDILPQWQVAYDSVPILAERYPAREVVITADPDFLFAGFASAFSEDNLGA
HHEEEEEECCCCCCCCEEECCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
EAEWHDLGIGTYLVDASCDVTNPPDVPPGTAPILTDIRVIGQIFGVEDRAEALIAETEAR
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEATAASNAGGGRTAFIFDSGDETPFSIGCCGGPGVLVETLGLENIAGDLEGRWVDLSWE
HEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHHCCCCCCEEEEEEEE
VVVEENPDVIVLIEADWSSAAEKRDYMETDPVLSQLDAVRDGRFVIVPFSQTVLGMQFVD
EEEECCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
GLDNLTAQLAALN
HHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA