Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054646

Identifier: 89054646

GI number: 89054646

Start: 2163718

End: 2164854

Strand: Direct

Name: 89054646

Synonym: Jann_2155

Alternate gene names: NA

Gene position: 2163718-2164854 (Clockwise)

Preceding gene: 89054645

Following gene: 89054647

Centisome position: 50.11

GC content: 61.13

Gene sequence:

>1137_bases
ATGAACCGTAGACGCTTTCTCAAACTGACGGGGGGCGGCATTGTTCTTGCCGCTGGAAGCGTTGGCGCTTTTGCCCTGAC
CCGCACACCGACCGATGCGCTGGCCCCGTGGACTCTTGCGGGCAGCTACAGTGATCCGCGCATGAACGCGCTGTCCTATG
CAATTCTGGCGCCGAACCCGCACAACCGCCAGCCGTGGATCGTGAGCCTTGACGGCGATGACGGGCTGACCCTGTATTTC
GATACCGAGCGACAATTGCCCCATACCGACCCGTTTGACCGACAGTTGACGATTGGCCTTGGGTGCTTTCTGGAACTGAT
GCGTATGGCGGCCAACGCCAATGGCTACGACGTCGATGTCAGCCTGTTCCCCGAAGGCGAGGACAGGGAGCATCTGGACC
AACGCCCTGTCGCGCGGGCAACCTTTGCCCGGGCCACGCCGGCGGCGGACCCGTTGTTTGCCCATGTCATGGACCGACGG
TCCAACAAAGAGCCGTTCGAGACGGCTCGTGCAGTCCCGGCCAACGCCCTTGCCCGGATCTTGACCGTCGCCCGTCATAC
CGAGATCGGCGGCTCGACGACCGAGGTCGACATCGCCTATTGGCGGCAAGTGTCATCGCAGGCCCTGACAATCGAGATTG
AAACGCCCGACACCTACCGTGAAAGCGTGGATCTGATGCGGATTGGTAAGGCCGAGGTGAACGCCAATCCCGACGGCATC
GATTTCAGCGGTGCGATGTTTGAAACATTGGCATTTGCGGGTGTCATGACCCGCGATGCGCTTCTGGACACCTCATCCAT
CGGGTTTCAACAAGGTATGGCCGCGGTCCTTGCGAATACCGAAACCGCGATGGGACACCTTTGGATGGTCACGCAGGGCA
ACACACGCCGTAACCAGATCGCGGCGGGTGGGGATTGGCTGCGCATCAATCTGGCCTGCACGGCGGAGGGTTTGGGATTT
CAACCGCTCAGCCAGGCGCTTCAGGAATACCCGGAAATGACGGCGCTTTATGATGAAACACACCAGCGGCTTGCGCCGAA
CGGCGGAACCGTTCAGATGCTGGCACGGATCGGGTATGGTCCCGAGGTGCCGGTCAGCCCCCGTTGGCCCATAGATGCGA
AGATTGGGGACGCGTGA

Upstream 100 bases:

>100_bases
CATGGCCTCTGCGCGGACAAATTGCGCTTTACTAGTACGACATCGTACTATATGTAGTTCGATATCGCACCACACAGTCA
CTCACGCGAAGGAGATGATG

Downstream 100 bases:

>100_bases
GCCAAGATAGCGACATCACCGGAGAGGTATTTGGTTTCTTTACCGAAATCGGGATCATAAACCAATTGTCAACGGCAATG
CTGGCCAAGAGCCTGCCGGA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNRRRFLKLTGGGIVLAAGSVGAFALTRTPTDALAPWTLAGSYSDPRMNALSYAILAPNPHNRQPWIVSLDGDDGLTLYF
DTERQLPHTDPFDRQLTIGLGCFLELMRMAANANGYDVDVSLFPEGEDREHLDQRPVARATFARATPAADPLFAHVMDRR
SNKEPFETARAVPANALARILTVARHTEIGGSTTEVDIAYWRQVSSQALTIEIETPDTYRESVDLMRIGKAEVNANPDGI
DFSGAMFETLAFAGVMTRDALLDTSSIGFQQGMAAVLANTETAMGHLWMVTQGNTRRNQIAAGGDWLRINLACTAEGLGF
QPLSQALQEYPEMTALYDETHQRLAPNGGTVQMLARIGYGPEVPVSPRWPIDAKIGDA

Sequences:

>Translated_378_residues
MNRRRFLKLTGGGIVLAAGSVGAFALTRTPTDALAPWTLAGSYSDPRMNALSYAILAPNPHNRQPWIVSLDGDDGLTLYF
DTERQLPHTDPFDRQLTIGLGCFLELMRMAANANGYDVDVSLFPEGEDREHLDQRPVARATFARATPAADPLFAHVMDRR
SNKEPFETARAVPANALARILTVARHTEIGGSTTEVDIAYWRQVSSQALTIEIETPDTYRESVDLMRIGKAEVNANPDGI
DFSGAMFETLAFAGVMTRDALLDTSSIGFQQGMAAVLANTETAMGHLWMVTQGNTRRNQIAAGGDWLRINLACTAEGLGF
QPLSQALQEYPEMTALYDETHQRLAPNGGTVQMLARIGYGPEVPVSPRWPIDAKIGDA
>Mature_378_residues
MNRRRFLKLTGGGIVLAAGSVGAFALTRTPTDALAPWTLAGSYSDPRMNALSYAILAPNPHNRQPWIVSLDGDDGLTLYF
DTERQLPHTDPFDRQLTIGLGCFLELMRMAANANGYDVDVSLFPEGEDREHLDQRPVARATFARATPAADPLFAHVMDRR
SNKEPFETARAVPANALARILTVARHTEIGGSTTEVDIAYWRQVSSQALTIEIETPDTYRESVDLMRIGKAEVNANPDGI
DFSGAMFETLAFAGVMTRDALLDTSSIGFQQGMAAVLANTETAMGHLWMVTQGNTRRNQIAAGGDWLRINLACTAEGLGF
QPLSQALQEYPEMTALYDETHQRLAPNGGTVQMLARIGYGPEVPVSPRWPIDAKIGDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41237; Mature: 41237

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRRFLKLTGGGIVLAAGSVGAFALTRTPTDALAPWTLAGSYSDPRMNALSYAILAPNP
CCCCEEEEEECCEEEEEECCCCEEEEECCCCHHCCCEEEECCCCCCCCCCEEEEEECCCC
HNRQPWIVSLDGDDGLTLYFDTERQLPHTDPFDRQLTIGLGCFLELMRMAANANGYDVDV
CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEE
SLFPEGEDREHLDQRPVARATFARATPAADPLFAHVMDRRSNKEPFETARAVPANALARI
EECCCCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHH
LTVARHTEIGGSTTEVDIAYWRQVSSQALTIEIETPDTYRESVDLMRIGKAEVNANPDGI
HHHHHHCCCCCCCEEEEHHHHHHCCCCEEEEEEECCHHHHHHHHHHEECCCCCCCCCCCC
DFSGAMFETLAFAGVMTRDALLDTSSIGFQQGMAAVLANTETAMGHLWMVTQGNTRRNQI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCEEEEEEECCCCCCCEE
AAGGDWLRINLACTAEGLGFQPLSQALQEYPEMTALYDETHQRLAPNGGTVQMLARIGYG
ECCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
PEVPVSPRWPIDAKIGDA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRRRFLKLTGGGIVLAAGSVGAFALTRTPTDALAPWTLAGSYSDPRMNALSYAILAPNP
CCCCEEEEEECCEEEEEECCCCEEEEECCCCHHCCCEEEECCCCCCCCCCEEEEEECCCC
HNRQPWIVSLDGDDGLTLYFDTERQLPHTDPFDRQLTIGLGCFLELMRMAANANGYDVDV
CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEE
SLFPEGEDREHLDQRPVARATFARATPAADPLFAHVMDRRSNKEPFETARAVPANALARI
EECCCCCCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHH
LTVARHTEIGGSTTEVDIAYWRQVSSQALTIEIETPDTYRESVDLMRIGKAEVNANPDGI
HHHHHHCCCCCCCEEEEHHHHHHCCCCEEEEEEECCHHHHHHHHHHEECCCCCCCCCCCC
DFSGAMFETLAFAGVMTRDALLDTSSIGFQQGMAAVLANTETAMGHLWMVTQGNTRRNQI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCEEEEEEECCCCCCCEE
AAGGDWLRINLACTAEGLGFQPLSQALQEYPEMTALYDETHQRLAPNGGTVQMLARIGYG
ECCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
PEVPVSPRWPIDAKIGDA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA