| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yjgR [H]
Identifier: 89054641
GI number: 89054641
Start: 2157846
End: 2159408
Strand: Direct
Name: yjgR [H]
Synonym: Jann_2150
Alternate gene names: 89054641
Gene position: 2157846-2159408 (Clockwise)
Preceding gene: 89054639
Following gene: 89054642
Centisome position: 49.97
GC content: 63.85
Gene sequence:
>1563_bases ATGGCAGATGCGGTGGAAAACGGGATCTTCGTGGGCGGTGGCGGGCCGGATTACGGGCAGGCTCAGGTGCTGCGCCCCGA TTATGCCAACCGGCACGGGCTGATCGCCGGGGCGACCGGCACCGGCAAAACGGTCACGCTTCAGATCCTGGCCGAAAGCT TCTCGGCCATGGGCGTTCCCGTGGTCCTCTCGGACGTCAAGGGGGACCTGTCTGGCCTGGCCCAGGCGGGGTCGGAGGGC TTCAAACTTCATGGCGCGTTCACGGACCGGGCCACCAAGATCAACTTCACCGATTACGCCTACCGGGCCTTTCCCGTCAC GTTCTGGGATCTGTTCGGCCAGCAGGGCCATCCCGTGCGGACCACCGTGGCCGAGATGGGGCCGCTGTTGCTGTCGCGGC TACTGGAACTGACCAATGCCCAAGAAGGCGTGCTGAACATCGCCTTCCGTGTGGCGGACGAGGAGGAATGGGCGCTTCTG GACCTCAAGGATCTGCAAGCGCTGCTGGTCTGGGTTGGCGAGAACCGTAAGGACCTGTCCCTGCGCTACGGCAACGTCTC CACCGCTTCCGTGGGTGCGATCCAGCGCCGCCTTTTGGTGTTGGAGAACGAGGGCGGTGCGGACTTTTTCGGTGAACCCG CGCTGGAGCTGGACGATCTGTTCCTGACCGACGACGAAGGGGCAGGGCGCATCAATATCATCGCGGCCGACAAGCTGATG CAATCCCCGCGCCTCTACGCCACGTTCCTGCTGTGGCTCCTGTCTGAACTGTTCGAGACCTTGCCTGAGGTCGGTGACCC CGATAAACCGAAGTTGGTCTTTTTCTTTGATGAGGCGCATCTTCTGTTTGAAGACGCCCCCAAAGCGCTGGTCGACAAGG TCGAACAGGTCGCGCGGCTGATCCGCTCCAAAGGCGTTGGGGTCTATTTTATCACCCAAAACCCGGCGGATGTGCCCGAG GATATCCTGGGTCAGCTCGGCAACCGCATTCAACATGCCCTGCGTGCGTTTACCGCCAAGGACCGCCGCGCGCTGCAACA GGCGGCGCAGAATTACCGCGATAATCCCGATCTCGATATCGAGGACGCGATCCGCGAGGTTGGCGTGGGGGAGGCCGTCA CATCCCTGCTGGAACGCAAAGGCATTCCCGGGATCGCGCAACGCACGCTGATCCGGCCCCCGTCGTCACAGCTTGGCCCC ATTGAGGTTGCAACGCGCGCCGCCCTGATGGGCATGTCGCCCGTCGCCGGAAAATACGATACGGTCCAAGACCGCGAAAG CGCCTACGAAATCCTGCAAAAGCGGGCATCTGAGGCCGCGCAGGAGGCCGAGAAGGCCGAAGAACAGGAAGAACAGGCGG AAGCCGCAGAACGCGAGTACCGTGCAGGCCGCCGCTACACCGGAGGCAGCGTCAGCCGGTCTACCTCCAAACCGCGGCGC CGCTCCTCGCGCTCCGACAGCATCGGAACCACCTTCGCCAAGAGTTTCGCGCGCCAGATGGGCAGCCGGTCCGGGCGGGC CGTGGTCCGTGGCATCCTCGGCGGTCTGTTCCGGGGCCGCTGA
Upstream 100 bases:
>100_bases GTCAACACCGGCCAGATGGCGCGGTGATGAACTCACTCTGGCGCATAAAGGTTAAAAATGTATTGTTTCCCATGGAAAAA ATGAAAAAGGGCAGTGGGCG
Downstream 100 bases:
>100_bases ATGGCGGAGGATTGCGTCTTCTGTCGCATCATCGCCGGAACGGAGCCTGCGAGCATCGTTCATGACGACGAAAGCTGTCT GGCTTTCATGATCCTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEG FKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALL DLKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPE DILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGP IEVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR
Sequences:
>Translated_520_residues MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEG FKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALL DLKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPE DILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGP IEVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR >Mature_519_residues ADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEGF KLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLD LKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLMQ SPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPED ILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPI EVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRRR SSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=499, Percent_Identity=53.7074148296593, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 56774; Mature: 56643
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVP CCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCC VVLSDVKGDLSGLAQAGSEGFKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVR EEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHH TTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLDLKDLQALLVWVGENRKDLS HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCE LRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM EEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHHH QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARL HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHH IRSKGVGVYFITQNPADVPEDILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDI HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPIEVATRAALMGMSPVAGKYD HHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC TVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVP CCCCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCC VVLSDVKGDLSGLAQAGSEGFKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVR EEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHH TTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLDLKDLQALLVWVGENRKDLS HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCE LRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM EEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHHH QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARL HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHH IRSKGVGVYFITQNPADVPEDILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDI HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPIEVATRAALMGMSPVAGKYD HHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC TVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]