Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yjgR [H]

Identifier: 89054641

GI number: 89054641

Start: 2157846

End: 2159408

Strand: Direct

Name: yjgR [H]

Synonym: Jann_2150

Alternate gene names: 89054641

Gene position: 2157846-2159408 (Clockwise)

Preceding gene: 89054639

Following gene: 89054642

Centisome position: 49.97

GC content: 63.85

Gene sequence:

>1563_bases
ATGGCAGATGCGGTGGAAAACGGGATCTTCGTGGGCGGTGGCGGGCCGGATTACGGGCAGGCTCAGGTGCTGCGCCCCGA
TTATGCCAACCGGCACGGGCTGATCGCCGGGGCGACCGGCACCGGCAAAACGGTCACGCTTCAGATCCTGGCCGAAAGCT
TCTCGGCCATGGGCGTTCCCGTGGTCCTCTCGGACGTCAAGGGGGACCTGTCTGGCCTGGCCCAGGCGGGGTCGGAGGGC
TTCAAACTTCATGGCGCGTTCACGGACCGGGCCACCAAGATCAACTTCACCGATTACGCCTACCGGGCCTTTCCCGTCAC
GTTCTGGGATCTGTTCGGCCAGCAGGGCCATCCCGTGCGGACCACCGTGGCCGAGATGGGGCCGCTGTTGCTGTCGCGGC
TACTGGAACTGACCAATGCCCAAGAAGGCGTGCTGAACATCGCCTTCCGTGTGGCGGACGAGGAGGAATGGGCGCTTCTG
GACCTCAAGGATCTGCAAGCGCTGCTGGTCTGGGTTGGCGAGAACCGTAAGGACCTGTCCCTGCGCTACGGCAACGTCTC
CACCGCTTCCGTGGGTGCGATCCAGCGCCGCCTTTTGGTGTTGGAGAACGAGGGCGGTGCGGACTTTTTCGGTGAACCCG
CGCTGGAGCTGGACGATCTGTTCCTGACCGACGACGAAGGGGCAGGGCGCATCAATATCATCGCGGCCGACAAGCTGATG
CAATCCCCGCGCCTCTACGCCACGTTCCTGCTGTGGCTCCTGTCTGAACTGTTCGAGACCTTGCCTGAGGTCGGTGACCC
CGATAAACCGAAGTTGGTCTTTTTCTTTGATGAGGCGCATCTTCTGTTTGAAGACGCCCCCAAAGCGCTGGTCGACAAGG
TCGAACAGGTCGCGCGGCTGATCCGCTCCAAAGGCGTTGGGGTCTATTTTATCACCCAAAACCCGGCGGATGTGCCCGAG
GATATCCTGGGTCAGCTCGGCAACCGCATTCAACATGCCCTGCGTGCGTTTACCGCCAAGGACCGCCGCGCGCTGCAACA
GGCGGCGCAGAATTACCGCGATAATCCCGATCTCGATATCGAGGACGCGATCCGCGAGGTTGGCGTGGGGGAGGCCGTCA
CATCCCTGCTGGAACGCAAAGGCATTCCCGGGATCGCGCAACGCACGCTGATCCGGCCCCCGTCGTCACAGCTTGGCCCC
ATTGAGGTTGCAACGCGCGCCGCCCTGATGGGCATGTCGCCCGTCGCCGGAAAATACGATACGGTCCAAGACCGCGAAAG
CGCCTACGAAATCCTGCAAAAGCGGGCATCTGAGGCCGCGCAGGAGGCCGAGAAGGCCGAAGAACAGGAAGAACAGGCGG
AAGCCGCAGAACGCGAGTACCGTGCAGGCCGCCGCTACACCGGAGGCAGCGTCAGCCGGTCTACCTCCAAACCGCGGCGC
CGCTCCTCGCGCTCCGACAGCATCGGAACCACCTTCGCCAAGAGTTTCGCGCGCCAGATGGGCAGCCGGTCCGGGCGGGC
CGTGGTCCGTGGCATCCTCGGCGGTCTGTTCCGGGGCCGCTGA

Upstream 100 bases:

>100_bases
GTCAACACCGGCCAGATGGCGCGGTGATGAACTCACTCTGGCGCATAAAGGTTAAAAATGTATTGTTTCCCATGGAAAAA
ATGAAAAAGGGCAGTGGGCG

Downstream 100 bases:

>100_bases
ATGGCGGAGGATTGCGTCTTCTGTCGCATCATCGCCGGAACGGAGCCTGCGAGCATCGTTCATGACGACGAAAGCTGTCT
GGCTTTCATGATCCTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEG
FKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALL
DLKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM
QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPE
DILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGP
IEVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR
RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR

Sequences:

>Translated_520_residues
MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEG
FKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALL
DLKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM
QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPE
DILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGP
IEVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR
RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR
>Mature_519_residues
ADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVPVVLSDVKGDLSGLAQAGSEGF
KLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVRTTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLD
LKDLQALLVWVGENRKDLSLRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLMQ
SPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPED
ILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDIEDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPI
EVATRAALMGMSPVAGKYDTVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRRR
SSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=499, Percent_Identity=53.7074148296593, Blast_Score=498, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 56774; Mature: 56643

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVP
CCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCC
VVLSDVKGDLSGLAQAGSEGFKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVR
EEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHH
TTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLDLKDLQALLVWVGENRKDLS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCE
LRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM
EEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHHH
QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARL
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHH
IRSKGVGVYFITQNPADVPEDILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDI
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPIEVATRAALMGMSPVAGKYD
HHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
TVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADAVENGIFVGGGGPDYGQAQVLRPDYANRHGLIAGATGTGKTVTLQILAESFSAMGVP
CCCCCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCC
VVLSDVKGDLSGLAQAGSEGFKLHGAFTDRATKINFTDYAYRAFPVTFWDLFGQQGHPVR
EEEHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHH
TTVAEMGPLLLSRLLELTNAQEGVLNIAFRVADEEEWALLDLKDLQALLVWVGENRKDLS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCE
LRYGNVSTASVGAIQRRLLVLENEGGADFFGEPALELDDLFLTDDEGAGRINIIAADKLM
EEECCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEHHHHH
QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARL
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHH
IRSKGVGVYFITQNPADVPEDILGQLGNRIQHALRAFTAKDRRALQQAAQNYRDNPDLDI
HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EDAIREVGVGEAVTSLLERKGIPGIAQRTLIRPPSSQLGPIEVATRAALMGMSPVAGKYD
HHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
TVQDRESAYEILQKRASEAAQEAEKAEEQEEQAEAAEREYRAGRRYTGGSVSRSTSKPRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
RSSRSDSIGTTFAKSFARQMGSRSGRAVVRGILGGLFRGR
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]