| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054631
Identifier: 89054631
GI number: 89054631
Start: 2148057
End: 2148830
Strand: Direct
Name: 89054631
Synonym: Jann_2140
Alternate gene names: NA
Gene position: 2148057-2148830 (Clockwise)
Preceding gene: 89054630
Following gene: 89054632
Centisome position: 49.75
GC content: 56.59
Gene sequence:
>774_bases ATGAACAGGCTCTTTTCCATAAACCCTCTGACGGTCGCCATCGCGGTCGTGGCCGCTTTGATCGGTCTCAGCTTTCTCGT GTCCGATCAAGGGGGTGACATGATCGGCGATCTGCGATTGATCTTCATTGCCTTGCCGATCGCCATCATCCTTTACAAAG GCTTCGACGATTTTGTCGGCATCACCCGTAAGACGGCCGAATGGCACCCGCGCTGGTGGCTTCTCAGCCTCCCGTTCCTG TCGGTCATCGCCCTGAACCTGACCAGCGTGAGCTTCTCCAATCTCCAGTTGAATTTTGGAGAAATCCCGCCAATGCTCTT CGACAACCTCATGGTAGGCTGGATCGAAGAAATCTGGCTGCGCGGCATCTTGTTTTACATCTGCTACAAGGCATGGGGTG CGACGCGCGTTGGCCTGATCGCGGCCTGCATCGTTCAGGCTTTGGCTTTTGGCGCCCTCCATTTCATGAATATCGGGGTA GAGCCCATCGCATTGGTGGGGTTTCAGGTGTTCTACGCGACGGCGATCGGGTTCGGGTTCGGCGCGCTGATGCTGATGAC GCGAAGCATCTGGCCGTCGATCCTTATCCATGCGGGCATCGACCTGGTGAGCGCGGTGGAAGAAACCTTCAATCCCGATT ACGTACCCGCGACGGAGTTTACCGGGATTCAGATGCTGATCGTTACCGTGATCCTGTTCGCGACCTTCGTGGTGCCGGGC CTCATCTACCTGTTCAAAGTGCCGATGCGCAGTGGTGGGACAGAGCCACAATAG
Upstream 100 bases:
>100_bases CTCGTGATCCTCATTCATTCGCTTTTCAACATCGTGACGTTTACCACGCTTTATCTGGGGATCGCGTGATGCGGCGCACA GAGACATTGGACCCATCGCG
Downstream 100 bases:
>100_bases GTCTGGCGCCTTTCGGGCGTCATCGCACCTTACACGATCGAACCCCGCGCCCTTCGCGGCCTGGATGGCGATCATCCGGC CTCAGGGCCACTGGCAACCC
Product: abortive infection protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNRLFSINPLTVAIAVVAALIGLSFLVSDQGGDMIGDLRLIFIALPIAIILYKGFDDFVGITRKTAEWHPRWWLLSLPFL SVIALNLTSVSFSNLQLNFGEIPPMLFDNLMVGWIEEIWLRGILFYICYKAWGATRVGLIAACIVQALAFGALHFMNIGV EPIALVGFQVFYATAIGFGFGALMLMTRSIWPSILIHAGIDLVSAVEETFNPDYVPATEFTGIQMLIVTVILFATFVVPG LIYLFKVPMRSGGTEPQ
Sequences:
>Translated_257_residues MNRLFSINPLTVAIAVVAALIGLSFLVSDQGGDMIGDLRLIFIALPIAIILYKGFDDFVGITRKTAEWHPRWWLLSLPFL SVIALNLTSVSFSNLQLNFGEIPPMLFDNLMVGWIEEIWLRGILFYICYKAWGATRVGLIAACIVQALAFGALHFMNIGV EPIALVGFQVFYATAIGFGFGALMLMTRSIWPSILIHAGIDLVSAVEETFNPDYVPATEFTGIQMLIVTVILFATFVVPG LIYLFKVPMRSGGTEPQ >Mature_257_residues MNRLFSINPLTVAIAVVAALIGLSFLVSDQGGDMIGDLRLIFIALPIAIILYKGFDDFVGITRKTAEWHPRWWLLSLPFL SVIALNLTSVSFSNLQLNFGEIPPMLFDNLMVGWIEEIWLRGILFYICYKAWGATRVGLIAACIVQALAFGALHFMNIGV EPIALVGFQVFYATAIGFGFGALMLMTRSIWPSILIHAGIDLVSAVEETFNPDYVPATEFTGIQMLIVTVILFATFVVPG LIYLFKVPMRSGGTEPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28326; Mature: 28326
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLFSINPLTVAIAVVAALIGLSFLVSDQGGDMIGDLRLIFIALPIAIILYKGFDDFVG CCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ITRKTAEWHPRWWLLSLPFLSVIALNLTSVSFSNLQLNFGEIPPMLFDNLMVGWIEEIWL CCCCCCCCCCCEEEHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHHHHHHHHHH RGILFYICYKAWGATRVGLIAACIVQALAFGALHFMNIGVEPIALVGFQVFYATAIGFGF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GALMLMTRSIWPSILIHAGIDLVSAVEETFNPDYVPATEFTGIQMLIVTVILFATFVVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIYLFKVPMRSGGTEPQ HHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRLFSINPLTVAIAVVAALIGLSFLVSDQGGDMIGDLRLIFIALPIAIILYKGFDDFVG CCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ITRKTAEWHPRWWLLSLPFLSVIALNLTSVSFSNLQLNFGEIPPMLFDNLMVGWIEEIWL CCCCCCCCCCCEEEHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHHHHHHHHHH RGILFYICYKAWGATRVGLIAACIVQALAFGALHFMNIGVEPIALVGFQVFYATAIGFGF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GALMLMTRSIWPSILIHAGIDLVSAVEETFNPDYVPATEFTGIQMLIVTVILFATFVVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIYLFKVPMRSGGTEPQ HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA