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The map label for this gene is fucU [H]

Identifier: 89054611

GI number: 89054611

Start: 2129661

End: 2130113

Strand: Direct

Name: fucU [H]

Synonym: Jann_2120

Alternate gene names: 89054611

Gene position: 2129661-2130113 (Clockwise)

Preceding gene: 89054610

Following gene: 89054612

Centisome position: 49.32

GC content: 62.47

Gene sequence:

>453_bases
ATGCTTAAAGGGATCGACCCGCGCCTGAACGCGGATGTGCTTCATTGCCTGCGCGCGATGGGCCATGGGGACACGCTGGT
CATTGCGGACACGAATTTCCCCGCCGACAGCGTGGCGCGCCACACGATCTATGGCGAATTGCTGAGGATGGAGAACCTGA
CCTGCGGCGCGGCGATGGAGGCCATCTTGTCCGTCCTGCCGCTTGATACCTTCGTGGATGACTTTGCGGCCCGGATGGAG
GTTGTGGACAGCCCCGACGAAATCCCTGACGTGCAGGGCGAGGTGCAGGAGCAGATCGACCGTGCCGAGGGGCGACCCCG
CCCGATGGTCAGCGTCGAGCGGTTTGAGTTCTACGACCAGGCCCGCGAAAGCTATGCCGTCATTCAGACCGGTGAGCGCC
GGTTTTACGGCTGCTTTATCCTGCGCAAAGGTGTGATCGGACCCGACGCATGA

Upstream 100 bases:

>100_bases
TGATCCGTGCCTGCCTCTGGTTCAGGGAACGAGGGCACAAGCCGTCTGGACCGATATCGAGGGTGCGGTTTAGGGTGCAT
CAAACAGGGAGAGATTTGCC

Downstream 100 bases:

>100_bases
GCCATGATGTCGTCATTCTGGGCGTGTTCGTGGCCGACACCGCGTACCGTGCTGATCGCCAGCCAAAGATGGGTGAAACG
ATCCTGGGCAAGTCATTCGC

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLKGIDPRLNADVLHCLRAMGHGDTLVIADTNFPADSVARHTIYGELLRMENLTCGAAMEAILSVLPLDTFVDDFAARME
VVDSPDEIPDVQGEVQEQIDRAEGRPRPMVSVERFEFYDQARESYAVIQTGERRFYGCFILRKGVIGPDA

Sequences:

>Translated_150_residues
MLKGIDPRLNADVLHCLRAMGHGDTLVIADTNFPADSVARHTIYGELLRMENLTCGAAMEAILSVLPLDTFVDDFAARME
VVDSPDEIPDVQGEVQEQIDRAEGRPRPMVSVERFEFYDQARESYAVIQTGERRFYGCFILRKGVIGPDA
>Mature_150_residues
MLKGIDPRLNADVLHCLRAMGHGDTLVIADTNFPADSVARHTIYGELLRMENLTCGAAMEAILSVLPLDTFVDDFAARME
VVDSPDEIPDVQGEVQEQIDRAEGRPRPMVSVERFEFYDQARESYAVIQTGERRFYGCFILRKGVIGPDA

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=150, Percent_Identity=43.3333333333333, Blast_Score=112, Evalue=1e-25,
Organism=Homo sapiens, GI148596951, Length=134, Percent_Identity=41.7910447761194, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789169, Length=145, Percent_Identity=30.3448275862069, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16746; Mature: 16746

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGIDPRLNADVLHCLRAMGHGDTLVIADTNFPADSVARHTIYGELLRMENLTCGAAME
CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
AILSVLPLDTFVDDFAARMEVVDSPDEIPDVQGEVQEQIDRAEGRPRPMVSVERFEFYDQ
HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ARESYAVIQTGERRFYGCFILRKGVIGPDA
HHHHEEEEECCCCCHHHHHEEECCCCCCCC
>Mature Secondary Structure
MLKGIDPRLNADVLHCLRAMGHGDTLVIADTNFPADSVARHTIYGELLRMENLTCGAAME
CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
AILSVLPLDTFVDDFAARMEVVDSPDEIPDVQGEVQEQIDRAEGRPRPMVSVERFEFYDQ
HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ARESYAVIQTGERRFYGCFILRKGVIGPDA
HHHHEEEEECCCCCHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA