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The map label for this gene is xylA [H]

Identifier: 89054599

GI number: 89054599

Start: 2116526

End: 2117497

Strand: Direct

Name: xylA [H]

Synonym: Jann_2108

Alternate gene names: 89054599

Gene position: 2116526-2117497 (Clockwise)

Preceding gene: 89054598

Following gene: 89054600

Centisome position: 49.02

GC content: 62.65

Gene sequence:

>972_bases
ATGAGCCGTCCAAATCGCCCCCGCTATGCCGCGCGGCTCAACGCGTTCAAACAGCTCACGCCGGGCTCGGATGTGCGGGA
CTGGATCGCGGCGGCGGGACAGGTGGGCGGATTGGGGGCGGCGGACCTGAACTTCCCAGACCATTTTGCGGTCTATGACG
CGGACCAGATGGGGAATTTTCTGGGGGAGGCCGCGCTGACTTTGAACGGGATCGCGATGCGGTACTATACCGACCCCGGT
TTCAAACTGGGCGCGTTCACGCATCCTGATGCCGCTGTCAGACAGGCCGCCTTGGATGTCACCAAACAGGGTATCGACAC
CTGTGCCCGCATGGGCGGCAAAACGGTCACTTTGTGGATGGGGCAGGACGGGTTCGATTATGCGTTTCAGATGGATTACG
GGCTGGCCTGGGATCGCACGGTCGCGGCCATCGCCGATATCTGCGCCCATGACCCAAACATCGACATCGCGATTGAATAC
AAACCGAATGAGCCGCGGGCCTTTGCCCTGATGCCGGATATCGGCACCACGTTGCTGGCCTGCCGCGAGGTGGGCGCGGT
CAATCTGGGCGTGACGCTCGACTTCGCCCATGTCCTTTACGCCGATGAGATGCCCGCCCATTCCGCCGCGCTGATCGGGC
GGCATTCGCGGATGATCGGCCTGCATCTGAACGACGGCTACGGCAAGCGCGACGATGGGCTGATGGTGGGCTCGGTCCAT
GCCATCCAGACCGTCGAATTGCTGGTCGCGATGCTGCGGATGGGCCAGACCGATGTGATCTATTTCGACACCTTCCCCGA
CATGGGCGGTCTGAACCCGATTGAGGAGGCGCGGACCAATGTCGCCGTCACGGATCGGCTTATGGCGGTTGCGGAAAGTC
TGATGGAAGATCCAGCGCTGGCGCAGGCGATTGACCGGCAGGATGCGGCGGCATCACACCGGATCGTCGCGCGGGCCTTG
TACGGCTCATGA

Upstream 100 bases:

>100_bases
ACAGCGGTGCTGCCCGTCTCGCAACACAAAATCATCTGCGGCAATTGTTGCGTTATCTGGAGCCTCTGGAGCGCGACCAC
CCTGAAATGTTCGCGCCGCG

Downstream 100 bases:

>100_bases
GCCTGCTCGTTGTCGGTGCGTTGCATTGGGATGTTGTGGTGCAGGCGTCCCGTTTGCCCCGCATCGACGAGACGTTGCGC
GGATCCGGCGTGACGTATCA

Product: xylose isomerase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSRPNRPRYAARLNAFKQLTPGSDVRDWIAAAGQVGGLGAADLNFPDHFAVYDADQMGNFLGEAALTLNGIAMRYYTDPG
FKLGAFTHPDAAVRQAALDVTKQGIDTCARMGGKTVTLWMGQDGFDYAFQMDYGLAWDRTVAAIADICAHDPNIDIAIEY
KPNEPRAFALMPDIGTTLLACREVGAVNLGVTLDFAHVLYADEMPAHSAALIGRHSRMIGLHLNDGYGKRDDGLMVGSVH
AIQTVELLVAMLRMGQTDVIYFDTFPDMGGLNPIEEARTNVAVTDRLMAVAESLMEDPALAQAIDRQDAAASHRIVARAL
YGS

Sequences:

>Translated_323_residues
MSRPNRPRYAARLNAFKQLTPGSDVRDWIAAAGQVGGLGAADLNFPDHFAVYDADQMGNFLGEAALTLNGIAMRYYTDPG
FKLGAFTHPDAAVRQAALDVTKQGIDTCARMGGKTVTLWMGQDGFDYAFQMDYGLAWDRTVAAIADICAHDPNIDIAIEY
KPNEPRAFALMPDIGTTLLACREVGAVNLGVTLDFAHVLYADEMPAHSAALIGRHSRMIGLHLNDGYGKRDDGLMVGSVH
AIQTVELLVAMLRMGQTDVIYFDTFPDMGGLNPIEEARTNVAVTDRLMAVAESLMEDPALAQAIDRQDAAASHRIVARAL
YGS
>Mature_322_residues
SRPNRPRYAARLNAFKQLTPGSDVRDWIAAAGQVGGLGAADLNFPDHFAVYDADQMGNFLGEAALTLNGIAMRYYTDPGF
KLGAFTHPDAAVRQAALDVTKQGIDTCARMGGKTVTLWMGQDGFDYAFQMDYGLAWDRTVAAIADICAHDPNIDIAIEYK
PNEPRAFALMPDIGTTLLACREVGAVNLGVTLDFAHVLYADEMPAHSAALIGRHSRMIGLHLNDGYGKRDDGLMVGSVHA
IQTVELLVAMLRMGQTDVIYFDTFPDMGGLNPIEEARTNVAVTDRLMAVAESLMEDPALAQAIDRQDAAASHRIVARALY
GS

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013453
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 34938; Mature: 34807

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPNRPRYAARLNAFKQLTPGSDVRDWIAAAGQVGGLGAADLNFPDHFAVYDADQMGNF
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHH
LGEAALTLNGIAMRYYTDPGFKLGAFTHPDAAVRQAALDVTKQGIDTCARMGGKTVTLWM
HHHHHHEECCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GQDGFDYAFQMDYGLAWDRTVAAIADICAHDPNIDIAIEYKPNEPRAFALMPDIGTTLLA
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCHHHHHHH
CREVGAVNLGVTLDFAHVLYADEMPAHSAALIGRHSRMIGLHLNDGYGKRDDGLMVGSVH
HHHCCCEEEEEEEEHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCEEEECHH
AIQTVELLVAMLRMGQTDVIYFDTFPDMGGLNPIEEARTNVAVTDRLMAVAESLMEDPAL
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHH
AQAIDRQDAAASHRIVARALYGS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRPNRPRYAARLNAFKQLTPGSDVRDWIAAAGQVGGLGAADLNFPDHFAVYDADQMGNF
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHH
LGEAALTLNGIAMRYYTDPGFKLGAFTHPDAAVRQAALDVTKQGIDTCARMGGKTVTLWM
HHHHHHEECCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GQDGFDYAFQMDYGLAWDRTVAAIADICAHDPNIDIAIEYKPNEPRAFALMPDIGTTLLA
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCHHHHHHH
CREVGAVNLGVTLDFAHVLYADEMPAHSAALIGRHSRMIGLHLNDGYGKRDDGLMVGSVH
HHHCCCEEEEEEEEHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCEEEECHH
AIQTVELLVAMLRMGQTDVIYFDTFPDMGGLNPIEEARTNVAVTDRLMAVAESLMEDPAL
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHH
AQAIDRQDAAASHRIVARALYGS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2798103; 3237716; 1610791; 10089406; 1610792; 1610793 [H]