| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is mntD [H]
Identifier: 89054574
GI number: 89054574
Start: 2091727
End: 2092653
Strand: Direct
Name: mntD [H]
Synonym: Jann_2083
Alternate gene names: 89054574
Gene position: 2091727-2092653 (Clockwise)
Preceding gene: 89054573
Following gene: 89054575
Centisome position: 48.44
GC content: 65.91
Gene sequence:
>927_bases ATGGGGTCCGAGTTCGTCCAGTTTTCCCTGACGCCGATCCTGATCGGGATGTTCGCGGCCATGGCGTGTGCGCTGCCGGG CAATTTCCTGATCCTGCGCCGCCAAGCGCTGATTGGTGACGCGATCAGCCATGTGGTGCTGCCGGGTATCGTGGTGGCGT TCCTGATCACCGGCGTGGTCAGCACTTGGCCAATGCTTCTGGGGGCTGCCGGGGCTGCACTTGTCGCCGTGATCCTGATC GAGGCGGTGCGCCGTCTGGGCAATATCGAGCCCGGTGCCGCCATGGGCGTCGTCTTCACCTCGCTCTTCGCTGGCGGCGT GTTGTTGCTGGAGCAATCGGACACATCCTCCGTGCATCTGGACGTCGAACACGCGCTGATGGGCAATCTGGAGCAATTGA TCTGGCTGCGGGCTGAGGGTTGGGGATCTGTGCTGGACCCGGTGGCGCTGTCGCATCTGCCGCCCGAATTGCCCCGGATG GCGGTGGTCTTCGCGCTCATCGCGGTGCTTACGGCGGTCTTCTGGCGGCCCCTGAAGCTCGCCTCCTTCGATGAGGGGTT CGCCCGGGCCCTTGGCCTGCCAGTGTCACTGATCGGATTGGGCCTTGTGACATCTGCGGCTGCCGCAGCGGTCGCGGCCT TCGATGCGGTCGGCTCCATCATCGTGATCGCCATGTTCATCTGTCCCCCCGCCGCCGCACGCCTGATGACGAACCGGTTG GGTCTGCAAGTGGCGTGGAGCCTTGCGTTCGCCTGTCTTTCGGCCATTCTGGGCTACGTGCTGGCAGGCTACGGCCCACT TTGGATCGGGGCGTCGGGGTCTGTATCGGCGGCGGGCATGGTCGCGGTGGTATCGGGCGTGATCCTTGCGCTGGCGTGCC TCTTTGGTCCGGCCCGGGGCCGGGTGGGCGTGGCGGCCGGAGGGTGA
Upstream 100 bases:
>100_bases GCGCTGACGGGGCGCTATGACGGGCTGACCCCCATAGAGGACGTCTTCACCGCCGATGAGATCGCCCATTTCGATACAGC CATGATGAGGGGCGCTTAGC
Downstream 100 bases:
>100_bases TTGAGCCGCCGATTGTGGCGTGTGATGCGAGTCCTGGACCGAGTTGTATTGGCCCAGATGAAACAGGGGAGAGTGCCAAA TGGCGGGGAGAGCGCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MGSEFVQFSLTPILIGMFAAMACALPGNFLILRRQALIGDAISHVVLPGIVVAFLITGVVSTWPMLLGAAGAALVAVILI EAVRRLGNIEPGAAMGVVFTSLFAGGVLLLEQSDTSSVHLDVEHALMGNLEQLIWLRAEGWGSVLDPVALSHLPPELPRM AVVFALIAVLTAVFWRPLKLASFDEGFARALGLPVSLIGLGLVTSAAAAAVAAFDAVGSIIVIAMFICPPAAARLMTNRL GLQVAWSLAFACLSAILGYVLAGYGPLWIGASGSVSAAGMVAVVSGVILALACLFGPARGRVGVAAGG
Sequences:
>Translated_308_residues MGSEFVQFSLTPILIGMFAAMACALPGNFLILRRQALIGDAISHVVLPGIVVAFLITGVVSTWPMLLGAAGAALVAVILI EAVRRLGNIEPGAAMGVVFTSLFAGGVLLLEQSDTSSVHLDVEHALMGNLEQLIWLRAEGWGSVLDPVALSHLPPELPRM AVVFALIAVLTAVFWRPLKLASFDEGFARALGLPVSLIGLGLVTSAAAAAVAAFDAVGSIIVIAMFICPPAAARLMTNRL GLQVAWSLAFACLSAILGYVLAGYGPLWIGASGSVSAAGMVAVVSGVILALACLFGPARGRVGVAAGG >Mature_307_residues GSEFVQFSLTPILIGMFAAMACALPGNFLILRRQALIGDAISHVVLPGIVVAFLITGVVSTWPMLLGAAGAALVAVILIE AVRRLGNIEPGAAMGVVFTSLFAGGVLLLEQSDTSSVHLDVEHALMGNLEQLIWLRAEGWGSVLDPVALSHLPPELPRMA VVFALIAVLTAVFWRPLKLASFDEGFARALGLPVSLIGLGLVTSAAAAAVAAFDAVGSIIVIAMFICPPAAARLMTNRLG LQVAWSLAFACLSAILGYVLAGYGPLWIGASGSVSAAGMVAVVSGVILALACLFGPARGRVGVAAGG
Specific function: This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 31476; Mature: 31345
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEFVQFSLTPILIGMFAAMACALPGNFLILRRQALIGDAISHVVLPGIVVAFLITGVV CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STWPMLLGAAGAALVAVILIEAVRRLGNIEPGAAMGVVFTSLFAGGVLLLEQSDTSSVHL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEE DVEHALMGNLEQLIWLRAEGWGSVLDPVALSHLPPELPRMAVVFALIAVLTAVFWRPLKL EHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH ASFDEGFARALGLPVSLIGLGLVTSAAAAAVAAFDAVGSIIVIAMFICPPAAARLMTNRL CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GLQVAWSLAFACLSAILGYVLAGYGPLWIGASGSVSAAGMVAVVSGVILALACLFGPARG HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RVGVAAGG CEEECCCC >Mature Secondary Structure GSEFVQFSLTPILIGMFAAMACALPGNFLILRRQALIGDAISHVVLPGIVVAFLITGVV CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STWPMLLGAAGAALVAVILIEAVRRLGNIEPGAAMGVVFTSLFAGGVLLLEQSDTSSVHL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEE DVEHALMGNLEQLIWLRAEGWGSVLDPVALSHLPPELPRMAVVFALIAVLTAVFWRPLKL EHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH ASFDEGFARALGLPVSLIGLGLVTSAAAAAVAAFDAVGSIIVIAMFICPPAAARLMTNRL CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GLQVAWSLAFACLSAILGYVLAGYGPLWIGASGSVSAAGMVAVVSGVILALACLFGPARG HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RVGVAAGG CEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10760146 [H]