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The map label for this gene is 89054559

Identifier: 89054559

GI number: 89054559

Start: 2077362

End: 2078759

Strand: Direct

Name: 89054559

Synonym: Jann_2068

Alternate gene names: NA

Gene position: 2077362-2078759 (Clockwise)

Preceding gene: 89054558

Following gene: 89054562

Centisome position: 48.11

GC content: 65.45

Gene sequence:

>1398_bases
TTGGCCAGAGGCGTCGCGCCCGCCGAGGTGACCTGGGGCGGCACTGATACGCCGCGCGGGCTGTTTGATGAGCCGTCATC
CGTGGCGCAAAGCGGCGACACGAGCGTTCCGCGCAGCTTCATTTCCATGGCCGACAGTGTCGTCTGGCACAGCGATCCGT
CCCGCTTCGCGTGGCTCTATGCGTTTTTGTGGCGGCTGCGCGACGCCCCGCATCTGATGACAGATCGCGGTGACGCCGAC
CTTGCCCGTCTGCGCGCGATGGAGAAGAACGTGCACCGCTGCCAGCACAAGATGAAGGCTTTCGTGCGTTTCCGCGACAT
CGGTGAGGCGGAGACCCCCCGCCGGTCCTTTGCCGCCTGGTTCGAGCCGACCCATCACACGGTGGAGCCCACGGCGGGCT
TTTTCCAACGACGTTTCGCCGATATGGACTGGCGCATCATCACGCCCGACATTTCAGCCATTTTCGAAGGTGGCACGCTG
CGGTTCATTGAGGATCAGCCCAAACCGGGCCTGCCCGATGACGCGAGCGAGGCGCTGTGGATCACGTATTATCGCAACAT
CTTCAATCCGGCGCGCTTGAAGGTGCAGGCGATGCAGTCCGAGATGCCAAAAAAGTACTGGAAGAACCTGCCGGAGGCCG
CTGCGATCCCGGATCTGATCGCCACCGCGCCCGCCCGTGCCCGCGCGATGGCCGAGGCCGCGCCGACCTTGCCGCCAACC
CGCATGGCCTCCGCGCAGGAGCAGCAGCGCGCGTTTGCATCGTCTTGGGAGGGCTCGGATGATGCGTTTCTGGCAGCGGT
GAAGGGCTGCACGCGCTGTCCGCTCCATCGACACGCCACGCAGACCGTGCCCGGGGAAGGGCCGGCCAAGGCCGCGCTGA
TGATCGTGGGGGAGCAGCCGGGCGATCAGGAGGATTTGCAGGGTCGCCCCTTCGTGGGGCCCGCGGGTCACGTGTTCGAT
CAGGTCGCGGCGGAGGTGGGGTTGGACCGCGCAACCGCCTACATCACCAACGCCGTGAAGCATTTCAAGTTCGTGCCACG
GGGCAAGCGGCGTTTGCATCAGCGGCCCAATGCGGGGGAGGTCGCCTATTGCAAATGGTGGCTGGAGGCAGAGATTGCGC
GCGTGACCCCCAAGCTGATCCTGGCCATGGGGTCCACCGCGGCGCTTGCATTGACCGGGTCGGGCAACAACCTGCTGAAA
CGGTGCGGGACAATTGAAGCCGTCGCCGGGCGACCACCTGTCCTGATCTCTTTGCACCCCTCATACATCTTGCGGATCAA
GGATGCCGATCAGCGGGCGGAGGCCCGGCAGATGTACCAGCGTGATCTCGGGCGCGCCACACAGATGGTGCAGGAGCGGG
CCGGGCCGATCGGTCTCGCAGAAAACGGGCCGGAGTGA

Upstream 100 bases:

>100_bases
TCGCGCCCCCGCCCGAGCAGTTGACGCTTCTATGACGTAGCATGTGGTCTTGCCGCGGATCGGGACGGCGAAGGCTTGGC
GCGATGCGGCACGGGGGCTG

Downstream 100 bases:

>100_bases
GACGCTTCAGGTCCCGGTGCCAGCCCACACATTGCGCAAAACGGTGAGCAATTCGGGGGAGGAGACCGGCTTCTTCACCA
CCTTGTCGGTCGGCTCCATG

Product: uracil-DNA glycosylase superfamily protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase-Related Protein; DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; DNA-Directed DNA Polymerase; Uracil DNA Glycosylase; Phage DNA Polymerase; Helicase/Glycosylase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Glycosylase; Uracil DNA Glycosylase Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Type DNA Polymerase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage SPO1 DNA Polymerase; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLYAFLWRLRDAPHLMTDRGDAD
LARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAWFEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTL
RFIEDQPKPGLPDDASEALWITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPT
RMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQPGDQEDLQGRPFVGPAGHVFD
QVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGEVAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLK
RCGTIEAVAGRPPVLISLHPSYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE

Sequences:

>Translated_465_residues
MARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLYAFLWRLRDAPHLMTDRGDAD
LARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAWFEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTL
RFIEDQPKPGLPDDASEALWITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPT
RMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQPGDQEDLQGRPFVGPAGHVFD
QVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGEVAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLK
RCGTIEAVAGRPPVLISLHPSYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE
>Mature_464_residues
ARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLYAFLWRLRDAPHLMTDRGDADL
ARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAWFEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTLR
FIEDQPKPGLPDDASEALWITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPTR
MASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQPGDQEDLQGRPFVGPAGHVFDQ
VAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGEVAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLKR
CGTIEAVAGRPPVLISLHPSYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 51500; Mature: 51369

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLY
CCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHEECCCCHHHHHHH
AFLWRLRDAPHLMTDRGDADLARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAW
HHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTLRFIEDQPKPGLPDDASEALW
CCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCCCEE
ITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHCCCCCCH
RMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCC
GDQEDLQGRPFVGPAGHVFDQVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGE
CCHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
VAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLKRCGTIEAVAGRPPVLISLHP
EEEEEHHHHHHHHHHCHHHHHEECCCEEEEEECCCHHHHHHCCCEEEECCCCCEEEEECC
SYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLY
CCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHEECCCCHHHHHHH
AFLWRLRDAPHLMTDRGDADLARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAW
HHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTLRFIEDQPKPGLPDDASEALW
CCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCCCEE
ITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHCCCCCCH
RMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCC
GDQEDLQGRPFVGPAGHVFDQVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGE
CCHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
VAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLKRCGTIEAVAGRPPVLISLHP
EEEEEHHHHHHHHHHCHHHHHEECCCEEEEEECCCHHHHHHCCCEEEECCCCCEEEEECC
SYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA