Click here to switch to the map view.

The map label for this gene is 89054362

Identifier: 89054362

GI number: 89054362

Start: 1857993

End: 1858784

Strand: Direct

Name: 89054362

Synonym: Jann_1871

Alternate gene names: NA

Gene position: 1857993-1858784 (Clockwise)

Preceding gene: 89054360

Following gene: 89054364

Centisome position: 43.03

GC content: 65.66

Gene sequence:

>792_bases
TTGCCGGCAAAACCCACTACACCTGTATCCATGACCCAGACCCTCCCCGATGACACCGCCCCCTACGCCCGCCCGGGCGC
GCGTATCCCCGCGCTCGACATCGCGCGCACCGGCGCGCTTGCGGCCATGGTGCTGTTTCACTTCGTCTTTGATCTGGAGA
TGTTCGGCCATGTGCCGCGCGGGACTGCCACGACAGGCATCTGGCGGGCGCTGGCCGTGGCGACGGCGGGATCGTTCCTG
TGTCTCGCGGGTATGGGCCTGTGGCTGGCCCATGGCACCGGTATCCGCTGGCCCGCGTTCTGGCGGCGGTTTGCCAAGGT
GGCGGGGGCGGCGGGTCTGGTCAGCATCGGCACCTATATCGCTTTCCCCCATGCCTTCGTCTTCTTCGGCATCCTCCATT
CCATCGCGCTTTGCAGCCTGTTGGGCCTTCTTGCGCTGCGGTTGCCCGTTCTGGCCATCGCGGGCCTCGCCGTGGTCGTC
TTCTACGTGCCGGAGTTTGCCCGCTCGTCCGCATTCGACGCGCCCTATTGGTGGTGGACGGGCCTTCAGACCCGACCTCT
CAGCACGGTGGATTATGAACCGATCTTTCCCTGGTTCGCGCCGTTTCTCGCCGGGGTGGCGGTGTCCAAATTTGCCACAC
AGATGGGCCTGTGGGCGCGCCTCTCAACGCCCGCCCCGTCCCGGGTCATACATCTTGCGGGGCTGCCGGGCCGCCATTCG
CTGCTGATCTACCTGATCCATCAACCGATCCTGATCGGCCTTGTCTGGGGCGTCACGCAACTGATGCGCTGA

Upstream 100 bases:

>100_bases
TAATCCCCACATCTGCCTCACACGCAACCCGGTCCGGCGTGGCGCTGCCCCGCTCTCGTCTCTCCCCTGGCCCCCGATGT
CACATTCCAGGGGGTGCAGC

Downstream 100 bases:

>100_bases
CATGTCCCCACGCGCGGCCCTCGCACCGCCGGGCCTTCAGGCCCCCGGTGCGCCACGCCCAAACCCCGGAGGCTCTGCGC
CCCTTGGGGCGCGGGGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPAKPTTPVSMTQTLPDDTAPYARPGARIPALDIARTGALAAMVLFHFVFDLEMFGHVPRGTATTGIWRALAVATAGSFL
CLAGMGLWLAHGTGIRWPAFWRRFAKVAGAAGLVSIGTYIAFPHAFVFFGILHSIALCSLLGLLALRLPVLAIAGLAVVV
FYVPEFARSSAFDAPYWWWTGLQTRPLSTVDYEPIFPWFAPFLAGVAVSKFATQMGLWARLSTPAPSRVIHLAGLPGRHS
LLIYLIHQPILIGLVWGVTQLMR

Sequences:

>Translated_263_residues
MPAKPTTPVSMTQTLPDDTAPYARPGARIPALDIARTGALAAMVLFHFVFDLEMFGHVPRGTATTGIWRALAVATAGSFL
CLAGMGLWLAHGTGIRWPAFWRRFAKVAGAAGLVSIGTYIAFPHAFVFFGILHSIALCSLLGLLALRLPVLAIAGLAVVV
FYVPEFARSSAFDAPYWWWTGLQTRPLSTVDYEPIFPWFAPFLAGVAVSKFATQMGLWARLSTPAPSRVIHLAGLPGRHS
LLIYLIHQPILIGLVWGVTQLMR
>Mature_262_residues
PAKPTTPVSMTQTLPDDTAPYARPGARIPALDIARTGALAAMVLFHFVFDLEMFGHVPRGTATTGIWRALAVATAGSFLC
LAGMGLWLAHGTGIRWPAFWRRFAKVAGAAGLVSIGTYIAFPHAFVFFGILHSIALCSLLGLLALRLPVLAIAGLAVVVF
YVPEFARSSAFDAPYWWWTGLQTRPLSTVDYEPIFPWFAPFLAGVAVSKFATQMGLWARLSTPAPSRVIHLAGLPGRHSL
LIYLIHQPILIGLVWGVTQLMR

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28522; Mature: 28391

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKPTTPVSMTQTLPDDTAPYARPGARIPALDIARTGALAAMVLFHFVFDLEMFGHVPR
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTATTGIWRALAVATAGSFLCLAGMGLWLAHGTGIRWPAFWRRFAKVAGAAGLVSIGTYI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AFPHAFVFFGILHSIALCSLLGLLALRLPVLAIAGLAVVVFYVPEFARSSAFDAPYWWWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC
GLQTRPLSTVDYEPIFPWFAPFLAGVAVSKFATQMGLWARLSTPAPSRVIHLAGLPGRHS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH
LLIYLIHQPILIGLVWGVTQLMR
HHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PAKPTTPVSMTQTLPDDTAPYARPGARIPALDIARTGALAAMVLFHFVFDLEMFGHVPR
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTATTGIWRALAVATAGSFLCLAGMGLWLAHGTGIRWPAFWRRFAKVAGAAGLVSIGTYI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
AFPHAFVFFGILHSIALCSLLGLLALRLPVLAIAGLAVVVFYVPEFARSSAFDAPYWWWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC
GLQTRPLSTVDYEPIFPWFAPFLAGVAVSKFATQMGLWARLSTPAPSRVIHLAGLPGRHS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH
LLIYLIHQPILIGLVWGVTQLMR
HHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA