| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is bolA [C]
Identifier: 89054353
GI number: 89054353
Start: 1849442
End: 1849702
Strand: Direct
Name: bolA [C]
Synonym: Jann_1862
Alternate gene names: 89054353
Gene position: 1849442-1849702 (Clockwise)
Preceding gene: 89054350
Following gene: 89054358
Centisome position: 42.83
GC content: 59.77
Gene sequence:
>261_bases ATGATGACGCGGGTACAGAAAATTGAGGCGGCCCTGACGGCAGCATTTGCGCCGAAGGTCCTTGATGTGGTCGATGACAG TGAGGCCCACAGGGGCCACGCGGGTTATCAGGATGGCGGCGAAAGCCACTTCAACGTGACGATAGAAAGTGATCAGTTTC AGGGTCTTAGCCGGATCGCGAAGCACCGCGCGGTGCATGCGGCAATCGGGCCGGAGCTGATGTCAGAGATCCACGCGCTG GCGCTGACGATCCGGGAATAG
Upstream 100 bases:
>100_bases GAAATTGAACGGATCTTTGTCAGCCATGGCGCGTACCTTTTCGACTCGGAGAGCATAGAATAAGGTTTTGGTCGCTGAGG GGAAGGGTTACGACGGTGAA
Downstream 100 bases:
>100_bases CGGCTCGGGCGGATCGCTGGGATCCGGGGTCTCGTCGTCTGAGGACTGCCAGATATTTTCGACCTCCTCATCGGCCACAT CCCTAGGAGCGGGCGGGGGC
Product: transcriptional regulator BolA
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MMTRVQKIEAALTAAFAPKVLDVVDDSEAHRGHAGYQDGGESHFNVTIESDQFQGLSRIAKHRAVHAAIGPELMSEIHAL ALTIRE
Sequences:
>Translated_86_residues MMTRVQKIEAALTAAFAPKVLDVVDDSEAHRGHAGYQDGGESHFNVTIESDQFQGLSRIAKHRAVHAAIGPELMSEIHAL ALTIRE >Mature_86_residues MMTRVQKIEAALTAAFAPKVLDVVDDSEAHRGHAGYQDGGESHFNVTIESDQFQGLSRIAKHRAVHAAIGPELMSEIHAL ALTIRE
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Escherichia coli, GI87081740, Length=89, Percent_Identity=43.8202247191011, Blast_Score=65, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 9364; Mature: 9364
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTRVQKIEAALTAAFAPKVLDVVDDSEAHRGHAGYQDGGESHFNVTIESDQFQGLSRIA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHH KHRAVHAAIGPELMSEIHALALTIRE HHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMTRVQKIEAALTAAFAPKVLDVVDDSEAHRGHAGYQDGGESHFNVTIESDQFQGLSRIA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHH KHRAVHAAIGPELMSEIHALALTIRE HHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]