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The map label for this gene is glcB [H]

Identifier: 89054336

GI number: 89054336

Start: 1831612

End: 1833750

Strand: Direct

Name: glcB [H]

Synonym: Jann_1845

Alternate gene names: 89054336

Gene position: 1831612-1833750 (Clockwise)

Preceding gene: 89054335

Following gene: 89054337

Centisome position: 42.42

GC content: 64.0

Gene sequence:

>2139_bases
ATGACGTCACGGGTCGAGAAATGCGGTTTGCAGGTGGCACCAGAGTTGGCCGATTTCCTTGAGGCGCAGGCGCTGCCTGG
CAGCGGTGTCGCGGCCCAGACCTTCTGGCAAGGCTTCTCGGACCTGGCCCACGATCTGGCCCCAAAGAACGCGGCCCTGT
TGGCGCGGCGCGATGACCTGCAATCGCAGATCGATCAATGGCACATTGCCCACCGCGACACTGCCCATGACGCGGATGCC
TACCACGCGTTCCTCAGCGAGATCGGTTATCTTGTGCCCGAGGGGGAGGGGTTCGAAATCGACACCTCCAACATTGACCC
GGAAATTGCCACGGTCGCAGGCCCGCAATTGGTCGTGCCCATCACCAACGCGCGCTTTGCCCTGAACGCAGCCAATGCCC
GCTGGGGCAGCCTCTACGACGCCTTCTATGGCACCGATGCCATGGGGTCCCGTCCCACCAAGGGCGGCTATGACCGGGGG
CGGGGGGCGCGTGTCGTGGCCCGCGCGCGGGTGTTTCTGGACGAGGCGTTCCCGATTGTCGGCACCTCCCACGCCGATGT
GCGCCGCTACCACATCGAAAAGGGCGCGCTGCTGGTGGATGACAAGCCCCTGGCCGATCCGTCGCAATTCGCAGGCTACC
GGGGCCGCGCGAAAGCCCCCGATGGGGTGCTTCTGGTCAATAACGGCCTTCATGTGGAGCTGGTCTTTGACCGCGCCCAC
ACCATCGGCGCGCGGGATCAGGCGGGGCTGGCGGACGTTCGGATGGAAAGTGCGGTCTCTGCGATCATGGATTGCGAGGA
CAGCGTCGCCTGCGTCGATGCCGAGGATAAGGTTCTGGCCTATGCCAACTGGCTCGGCCTGATGAAGGGTAACTTGTCCG
AGACGTTCGAGAAGGGCGGGGCACAAATCACCCGCGCCCTGGCCCCGGACCTTCAGTTCACCGCGCCCGATGGCAGCGAC
AAGATCGTGAAGGGCCGCGCGCTGACGCTGGTGCGCAATGTGGGCCACTTGATGACCAACCCCGCCGTGCTCCTGCGCGA
TGGCGCGGAGATTTATGAAGGCCTGATGGACGCGATGATCACCACGCTCATCGCGATGCATGATTTGGTGCGGGATGGCG
GCAATTCCGTTGCGGGCTCAGTCTACGTCGTTAAACCCAAGATGCATGGCCCCGACGAAGTCGCCTTCACCAACGAGATC
TTCACCCGGGTCGAGGCGGCCCTCGGCCTGCCGGACTACACGGTCAAGATTGGTATCATGGATGAGGAACGGCGCACGTC
GGTGAACCTCAAGGAGTGTATCCGGGCCGCCAAGCACCGGGTCGCGTTCATCAATACCGGCTTTCTCGACCGCACCGGTG
ACGAGATCCATACGTCCATGGAAGCCGGGCCGTTCTCCCGCAAGGACTTCATCAAGCGCAAGGGCTGGATCACGGCCTAT
GAAAACCAGAACGTCGATATCGGGCTGGAATGCGGCTTGCGAGGCCGGGCACAGATCGGCAAGGGGATGTGGGCCAAACC
GGACGCCATGGCCGAGATGCTGGAGCAGAAGATTGAACATCCCCGCGCGGGTGCCAATTGCGCCTGGGTGCCATCGCCCA
CGGCGGCCACGCTGCACGCGCTGCATTACCACAAGGTGAACGTGGCCGATGTGCAGGCGCGTCTGCAAGCGGGGGGCAAG
CGCGCCTATGTCACCGCGCTGCTGGATATTCCGCTGGCCGCCTATCGCCGCTGGACCCGGGAGCAGGTGATCCGCGAGGT
GGAAAACAACGCGCAGGGGATCCTGGGCTATGTCGTGCGGTGGATCGATCAGGGCGTGGGATGCTCCAAAGTGCCGGATA
TCAACGGGGTGGAGTTGATGGAGGACCGCGCAACCTGCCGGATCTCGGCGCAACATATCGCCAACTGGCTGCACCATAAC
GTCCTGACCGAGGCGGATGTGGGCGAGGTCTTCCGCCGCATGGCCGTGGTGGTGGATGCGCAAAACGCCGGCGATCCGCT
GTATCGGCCCATGGCGCCGGGCTTCAACGGGATCGCCTATGCGGCGGCGTTGGACCTTGTTTTGAAGGGCCGGGCGCAGC
CATCGGGTTACACCGAGCCCGTTCTTCACGCGCGCCGGTTGGAGTGGAAGGCGGGCTAA

Upstream 100 bases:

>100_bases
GCGAAGTGATCGGCGCGGGGATCGCTTGCCCCGTTCCCACCCATCGCCTAGACCGCCAAGTTGACAAGATGGGCAATGGG
ACAAGACGGGAGAACAGCCA

Downstream 100 bases:

>100_bases
GGGCGCGGGTACAGTTGCAACACGCCGTCAGACCTGTACGGGCCAAGATCAAGCGGGGAGCGTTATTTGATGTGGGTCAA
CGACGGACCCGTGCGCCCAT

Product: malate synthase G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 711

Protein sequence:

>712_residues
MTSRVEKCGLQVAPELADFLEAQALPGSGVAAQTFWQGFSDLAHDLAPKNAALLARRDDLQSQIDQWHIAHRDTAHDADA
YHAFLSEIGYLVPEGEGFEIDTSNIDPEIATVAGPQLVVPITNARFALNAANARWGSLYDAFYGTDAMGSRPTKGGYDRG
RGARVVARARVFLDEAFPIVGTSHADVRRYHIEKGALLVDDKPLADPSQFAGYRGRAKAPDGVLLVNNGLHVELVFDRAH
TIGARDQAGLADVRMESAVSAIMDCEDSVACVDAEDKVLAYANWLGLMKGNLSETFEKGGAQITRALAPDLQFTAPDGSD
KIVKGRALTLVRNVGHLMTNPAVLLRDGAEIYEGLMDAMITTLIAMHDLVRDGGNSVAGSVYVVKPKMHGPDEVAFTNEI
FTRVEAALGLPDYTVKIGIMDEERRTSVNLKECIRAAKHRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKGWITAY
ENQNVDIGLECGLRGRAQIGKGMWAKPDAMAEMLEQKIEHPRAGANCAWVPSPTAATLHALHYHKVNVADVQARLQAGGK
RAYVTALLDIPLAAYRRWTREQVIREVENNAQGILGYVVRWIDQGVGCSKVPDINGVELMEDRATCRISAQHIANWLHHN
VLTEADVGEVFRRMAVVVDAQNAGDPLYRPMAPGFNGIAYAAALDLVLKGRAQPSGYTEPVLHARRLEWKAG

Sequences:

>Translated_712_residues
MTSRVEKCGLQVAPELADFLEAQALPGSGVAAQTFWQGFSDLAHDLAPKNAALLARRDDLQSQIDQWHIAHRDTAHDADA
YHAFLSEIGYLVPEGEGFEIDTSNIDPEIATVAGPQLVVPITNARFALNAANARWGSLYDAFYGTDAMGSRPTKGGYDRG
RGARVVARARVFLDEAFPIVGTSHADVRRYHIEKGALLVDDKPLADPSQFAGYRGRAKAPDGVLLVNNGLHVELVFDRAH
TIGARDQAGLADVRMESAVSAIMDCEDSVACVDAEDKVLAYANWLGLMKGNLSETFEKGGAQITRALAPDLQFTAPDGSD
KIVKGRALTLVRNVGHLMTNPAVLLRDGAEIYEGLMDAMITTLIAMHDLVRDGGNSVAGSVYVVKPKMHGPDEVAFTNEI
FTRVEAALGLPDYTVKIGIMDEERRTSVNLKECIRAAKHRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKGWITAY
ENQNVDIGLECGLRGRAQIGKGMWAKPDAMAEMLEQKIEHPRAGANCAWVPSPTAATLHALHYHKVNVADVQARLQAGGK
RAYVTALLDIPLAAYRRWTREQVIREVENNAQGILGYVVRWIDQGVGCSKVPDINGVELMEDRATCRISAQHIANWLHHN
VLTEADVGEVFRRMAVVVDAQNAGDPLYRPMAPGFNGIAYAAALDLVLKGRAQPSGYTEPVLHARRLEWKAG
>Mature_711_residues
TSRVEKCGLQVAPELADFLEAQALPGSGVAAQTFWQGFSDLAHDLAPKNAALLARRDDLQSQIDQWHIAHRDTAHDADAY
HAFLSEIGYLVPEGEGFEIDTSNIDPEIATVAGPQLVVPITNARFALNAANARWGSLYDAFYGTDAMGSRPTKGGYDRGR
GARVVARARVFLDEAFPIVGTSHADVRRYHIEKGALLVDDKPLADPSQFAGYRGRAKAPDGVLLVNNGLHVELVFDRAHT
IGARDQAGLADVRMESAVSAIMDCEDSVACVDAEDKVLAYANWLGLMKGNLSETFEKGGAQITRALAPDLQFTAPDGSDK
IVKGRALTLVRNVGHLMTNPAVLLRDGAEIYEGLMDAMITTLIAMHDLVRDGGNSVAGSVYVVKPKMHGPDEVAFTNEIF
TRVEAALGLPDYTVKIGIMDEERRTSVNLKECIRAAKHRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKGWITAYE
NQNVDIGLECGLRGRAQIGKGMWAKPDAMAEMLEQKIEHPRAGANCAWVPSPTAATLHALHYHKVNVADVQARLQAGGKR
AYVTALLDIPLAAYRRWTREQVIREVENNAQGILGYVVRWIDQGVGCSKVPDINGVELMEDRATCRISAQHIANWLHHNV
LTEADVGEVFRRMAVVVDAQNAGDPLYRPMAPGFNGIAYAAALDLVLKGRAQPSGYTEPVLHARRLEWKAG

Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family. GlcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789348, Length=724, Percent_Identity=54.6961325966851, Blast_Score=785, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR001465
- InterPro:   IPR006253 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 77680; Mature: 77549

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRVEKCGLQVAPELADFLEAQALPGSGVAAQTFWQGFSDLAHDLAPKNAALLARRDDL
CCCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHHH
QSQIDQWHIAHRDTAHDADAYHAFLSEIGYLVPEGEGFEIDTSNIDPEIATVAGPQLVVP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEECCCEEEEE
ITNARFALNAANARWGSLYDAFYGTDAMGSRPTKGGYDRGRGARVVARARVFLDEAFPIV
ECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GTSHADVRRYHIEKGALLVDDKPLADPSQFAGYRGRAKAPDGVLLVNNGLHVELVFDRAH
CCCCCHHHHEEECCCCEEECCCCCCCHHHHCCCCCCCCCCCCEEEEECCEEEEEEEECCH
TIGARDQAGLADVRMESAVSAIMDCEDSVACVDAEDKVLAYANWLGLMKGNLSETFEKGG
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCHHHHHHHCH
AQITRALAPDLQFTAPDGSDKIVKGRALTLVRNVGHLMTNPAVLLRDGAEIYEGLMDAMI
HHHHHHHCCCCEEECCCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
TTLIAMHDLVRDGGNSVAGSVYVVKPKMHGPDEVAFTNEIFTRVEAALGLPDYTVKIGIM
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
DEERRTSVNLKECIRAAKHRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKGWITAY
CCHHHCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCEEEE
ENQNVDIGLECGLRGRAQIGKGMWAKPDAMAEMLEQKIEHPRAGANCAWVPSPTAATLHA
CCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
LHYHKVNVADVQARLQAGGKRAYVTALLDIPLAAYRRWTREQVIREVENNAQGILGYVVR
HHHCCCCHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
WIDQGVGCSKVPDINGVELMEDRATCRISAQHIANWLHHNVLTEADVGEVFRRMAVVVDA
HHHCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEC
QNAGDPLYRPMAPGFNGIAYAAALDLVLKGRAQPSGYTEPVLHARRLEWKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
TSRVEKCGLQVAPELADFLEAQALPGSGVAAQTFWQGFSDLAHDLAPKNAALLARRDDL
CCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHHH
QSQIDQWHIAHRDTAHDADAYHAFLSEIGYLVPEGEGFEIDTSNIDPEIATVAGPQLVVP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEECCCEEEEE
ITNARFALNAANARWGSLYDAFYGTDAMGSRPTKGGYDRGRGARVVARARVFLDEAFPIV
ECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GTSHADVRRYHIEKGALLVDDKPLADPSQFAGYRGRAKAPDGVLLVNNGLHVELVFDRAH
CCCCCHHHHEEECCCCEEECCCCCCCHHHHCCCCCCCCCCCCEEEEECCEEEEEEEECCH
TIGARDQAGLADVRMESAVSAIMDCEDSVACVDAEDKVLAYANWLGLMKGNLSETFEKGG
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCHHHHHHHCH
AQITRALAPDLQFTAPDGSDKIVKGRALTLVRNVGHLMTNPAVLLRDGAEIYEGLMDAMI
HHHHHHHCCCCEEECCCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
TTLIAMHDLVRDGGNSVAGSVYVVKPKMHGPDEVAFTNEIFTRVEAALGLPDYTVKIGIM
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE
DEERRTSVNLKECIRAAKHRVAFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKGWITAY
CCHHHCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCEEEE
ENQNVDIGLECGLRGRAQIGKGMWAKPDAMAEMLEQKIEHPRAGANCAWVPSPTAATLHA
CCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
LHYHKVNVADVQARLQAGGKRAYVTALLDIPLAAYRRWTREQVIREVENNAQGILGYVVR
HHHCCCCHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
WIDQGVGCSKVPDINGVELMEDRATCRISAQHIANWLHHNVLTEADVGEVFRRMAVVVDA
HHHCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEC
QNAGDPLYRPMAPGFNGIAYAAALDLVLKGRAQPSGYTEPVLHARRLEWKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA